Saccharothrix sp. 6-C: IOD16_22220
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Entry
IOD16_22220 CDS
T09941
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IOD16_22220
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IOD16_22220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sacx02000
]
IOD16_22220
Transporters [BR:
sacx02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
IOD16_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Bmp
Motif
Other DBs
NCBI-ProteinID:
QQQ73949
LinkDB
All DBs
Position
complement(5370376..5371410)
Genome browser
AA seq
344 aa
AA seq
DB search
MSRKATTRLIAALSVGLALTACTGNTPEPAAGTGDQGGARVANDEPGEKVVIGFSAPAAD
HGWMAAITNAAKAEAAKYSDVELKVVEGTNDVNLQISQVETFINDKVDAIVLLPFDGAAL
TPVALKAMKAGITVINVDREFGSPFAARSTVLGDNYGMGVSAGTYVCQELGGKSDAVVAE
IAGIDSLPLTQERSKGFADALGDCGLKVNNRVAAEFTVESGERAAANLLQAAPRIDALWN
HDDDQGVGVTAAIKNSGRSEFFMVGGAGSANVMREIKAANGLHKATVVYPSTQGADGIRL
ARLAVQGKSLGDLVEVEVPRQVELFAPVVTKDNVDRYLPTAFES
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaggcaacaacccgtctcatcgccgcgctgtcggtcggcctcgccctcacc
gcctgcaccggcaacaccccggagcccgccgccggcaccggcgaccagggcggcgcccgg
gtcgccaacgacgagcccggcgagaaggtcgtcatcggcttctccgcgcccgccgccgac
cacggctggatggccgcgatcaccaacgccgccaaggcggaggcggcgaagtactccgac
gtcgagctgaaggtggtggagggcaccaacgacgtcaacctccagatcagccaggtcgag
acgttcatcaacgacaaggtcgacgcgatcgtgctgctgccgttcgacggcgcggcgctg
acgccggtggcgctcaaggcgatgaaggccggcatcacggtgatcaacgtcgaccgcgag
ttcggcagcccgttcgcggcgcgctccaccgtcctgggcgacaactacggcatgggcgtg
tccgccggcacctacgtctgccaggagctcggcggcaagtccgacgcggtcgtggccgag
atcgccggcatcgactcgctgcccctgacgcaggagcgcagcaagggcttcgccgacgcc
ctcggcgactgcgggttgaaggtgaacaaccgcgtggccgccgagttcaccgtggagagc
ggcgaacgggccgcggccaacctgctccaggccgcaccgcgcatcgacgccctctggaac
cacgacgacgaccagggcgtcggcgtgaccgcggcgatcaagaactccggtcgcagcgag
ttcttcatggtcggcggcgcgggctcggccaacgtcatgcgtgagatcaaggccgccaac
ggcctgcacaaggccaccgtggtctacccgtccacacagggcgcggacggcatccggctg
gcccggctggccgtgcagggcaagagcctcggcgacctggtcgaggtcgaggtgccgcgc
caggtcgagctgttcgccccggtcgtcaccaaggacaacgtcgaccgctacctgcccacc
gccttcgagtcctag
DBGET
integrated database retrieval system
