Saccharothrix sp. 6-C: IOD16_23360
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Entry
IOD16_23360 CDS
T09941
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IOD16_23360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sacx02000
]
IOD16_23360
Transporters [BR:
sacx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IOD16_23360
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQQ74150
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Position
5655416..5657038
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AA seq
540 aa
AA seq
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MKRHLRDATGRVRLPRRATAALALFTSAGLVLSGCAAAGGGVQTVSSTPVKGGVLKYRAA
GGGKSLDPATTTGYGLAVPLRGLVDSLVFNNPDGTFAPWLATKWEVNDNATRYAFTLRQD
VTFSNGEKFDATAVRLSYQALRDGGAKYAVANQWIGALAQITTPDPHTVVFDLVKPNSSF
LQAVSSTVLGVVAPATARLPFEKRQEGLGIIGSGPFVAAESRGEEGYTLVRRDDYAWAPE
PAANRGAPHLDKIEVRNIQDNSIAAAELRSGGLDLLHNTEPADKTEFSTSRDITIRREPL
PGSALGFAANIDVPGLDDVRVRRALALAVDRDAVLKRASAIDIAPKGAYTASNPYFTDQS
DKIKTDVAAAERLLDEAGWRRGADGVRAKAGARLSLELVYSPSTISHEPNIAVVQSQWKA
IGVELKFGSLTQAELNQRLQSGNYSFSWGSGTRPDADVLRSTYGGLDEELDEVFDQILAE
PDIAARKALATRASEIVLDEAYYIPLYDFIQPLAYRNSTHLPLLEATHIPWLGDAWIDQQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcacctccgcgacgcgaccggccgcgtccggctcccccgacgcgccaccgcg
gcgctcgccctgttcacgtcagccggtctcgtcctgtccggctgcgccgcggcgggcggc
ggcgtgcagaccgtgagcagcacgccggtcaagggtggcgtgctgaagtaccgggcggcg
ggcggcggcaagtcgctcgaccccgcgaccacgaccggctacggcctggccgtgccgttg
cgcggcctggtcgactccctggtgttcaacaacccggacggcacgttcgcgccctggctc
gccacgaagtgggaggtcaacgacaacgccacgcggtacgcgttcacgctccgccaggac
gtcaccttcagcaacggcgagaagttcgacgccaccgccgtccggctgagctaccaggcg
ctgcgcgacggtggcgccaagtacgccgtcgccaaccagtggatcggcgcgctcgcgcag
atcaccacacccgacccccacacggtcgtgttcgacctcgtcaagccgaactcgtcgttc
ctccaggcggtgtccagcaccgtgctcggcgtcgtggcgcccgccaccgcccgactgccg
ttcgagaagcgccaggaaggcctcggcatcatcggctccgggccgttcgtggcggccgag
agccgcggcgaggagggctacaccctcgtccgccgggacgactacgcctgggcgcccgag
cccgcggcgaaccggggagccccccacctcgacaagatcgaggtgcgcaacatccaggac
aacagcatcgccgcggccgaactgcgctccggcggcctcgacctgctgcacaacaccgaa
ccggcggacaagaccgagttctccaccagccgggacatcaccatccggcgggagccgctg
ccgggctcggcgctcgggttcgccgccaacatcgacgtgccgggactggacgacgtgcgg
gtccgccgcgcactggccctggccgtcgaccgcgacgccgtgctcaagcgcgcctcggcg
atcgacatcgcgcccaagggcgcctacaccgcgagcaacccgtacttcaccgaccagtcc
gacaagatcaagaccgacgtggcggcggcggaacgcctgctcgacgaagccggctggcgg
cggggcgccgacggtgtgcgcgccaaggccggcgcgcggctgtccctcgagctggtctac
agcccgtccaccatctcgcacgagccgaacatcgccgtggtccagtcgcagtggaaggcc
atcggcgtggagctgaagttcggcagcctcacccaggcggagctgaaccagcgcctgcag
tccggcaactactcgttctcgtggggctcgggcacccgccccgacgccgacgtgctgcgc
tccacctacggcggcctggacgaggagctggacgaggtcttcgaccagatcctggccgag
ccggacatcgccgcgcgcaaggcgctcgccacgcgcgcctcggagatcgtcctcgacgag
gcctactacatcccgctctacgacttcatccagccgctcgcctaccgcaacagcacgcac
ctgccgctgctggaggccacgcacatcccgtggctcggcgacgcctggatcgaccagcag
tga
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