Saccharothrix sp. 6-C: IOD16_27030
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Entry
IOD16_27030 CDS
T09941
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IOD16_27030 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_27030 (uvrA)
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IOD16_27030 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IOD16_27030 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_16
SMC_N
AAA_21
RsgA_GTPase
AAA_25
APS_kinase
nSTAND1
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QQQ74769
LinkDB
All DBs
Position
complement(6466883..6469756)
Genome browser
AA seq
957 aa
AA seq
DB search
MADRLVVRGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARAGKAH
CPTCGEAISKQTPQQIVDQVLAMESGTKFQVLAPVIRGRKGEYLDLFSTLQSQGYSRAKV
DGVVHALGEVPKLKKQEKHDIAVVIDRLSVKASSKQRLTDSVETALRLADGLVELEFVDV
PEGDPGRVRGFSEHLACPNGHPLAIEDLEPRSFSFNSPYGACPACTGIGVRKEVDPELVV
PDDELSLGEGAIAPWASGQTAEYFTRLLESLGLAIGFRMDTPWRQLPARAQKAVLHGVDE
QVNVRYKNRYGRERSYYANYEGVIPFLERRQEQTESEYMREKYEGYMREVPCPTCQGTRL
KPEILAVTLHHGRKGDKSIAEVCAMSVSECSDFLDGLKLGKRESMIAGAVLKEIQARLHF
LLDVGLNYLSLDRASGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHKLIE
TLIRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPGAGEHGGKVVHSGTYKELLKNKESITG
AYLAGRKEIPMPAARRKVDKKRQLTVVGAREHNLRGIDVSFPLGCLVSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVRGLDQVDKLVQVDQSPIGRTPRSNPATYTGVFDH
IRKLFAATTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGAR
YNRETLEVHYKGKTISEVLDMPIEEAATFFEPINAIHRHLRTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGKTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEH
NLDVIKTSDWLVDMGPEGGSGGGMVVAEGTPEQVADVTDSYTGQFLREALPAEAAVS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccggcttgtcgttcgcggggcgcgcgagcacaacctgcgaggggtggacctc
gacctgccgagggacagcctcatcgtgttcaccgggctgtccggctcgggcaagtccagc
ctcgccttcgacacgatcttcgccgagggccagcgccgctacgtcgagtcgctctcggcc
tacgcgcggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctg
tcgcccgcggtgtcgatcgaccagaagtcgaccagccgcaacccgcggtcgaccgtgggc
accatcaccgaggtctacgactacctgcggctgctctacgcccgcgccggcaaggcgcac
tgccccacctgcggcgaggcgatcagcaagcagacgccccagcagatcgtggaccaggtg
ctggccatggagtcgggcaccaagttccaggtgctcgccccggtcatccgcggccgcaag
ggcgagtacctcgacctgttctccacgctccagtcccagggctactcgcgcgccaaggtc
gacggcgtggtgcacgccctcggcgaggtgccgaagctcaagaagcaggagaagcacgac
atcgcggtcgtgatcgaccggctcagcgtcaaggcgagctccaagcagcggctgaccgac
tcggtggagacggcgctgcgcctggccgacggcctggtcgagctggagttcgtggacgtg
cccgagggcgacccgggccgcgtccgcggcttctccgagcacctggcctgcccgaacggc
cacccgctggccatcgaagacctggaaccgcggtcgttctcgttcaactcgccctacggc
gcctgccccgcctgcaccggcatcggcgtgcgcaaggaggtcgacccggagctggtcgtc
cccgacgacgagctgtcgctgggcgagggcgcgatcgcgccgtgggcgtccggccagacc
gccgagtacttcacccggctgctggagtccctcggcctcgccatcgggttccggatggac
acgccgtggcggcagctgcccgccagggcgcagaaggccgtgctgcacggcgtggacgag
caggtcaacgtccgctacaagaaccgctacggtcgcgaacgctcctactacgccaactac
gagggcgtgatcccgttcctggaacggcggcaggagcagaccgagtccgagtacatgcgg
gagaagtacgagggctacatgcgggaggtgccgtgccccacgtgccagggcacgcgcctc
aagccggagatcctggccgtcacgctgcaccacgggcgcaagggcgacaagtccatcgcc
gaggtgtgcgccatgtcggtgtcggagtgctccgacttcctcgacgggctcaagctcggc
aagcgcgagtcgatgatcgcgggcgcggtgctcaaggagatccaggcccggctgcacttc
ctgctcgacgtcggcctcaactacctgtcactggaccgcgcgtccggcacactttcgggt
ggagaagctcagcggatcaggttggcgacgcagatcggctccgggctcgtcggcgtgctc
tacgtgctggacgaaccctcgatcgggttgcaccagcgtgacaaccacaagttgatcgaa
accctgatccggctgcgcgacctgggcaacacgctcatcgtggtcgagcacgacgaggac
accatccgcacctccgactgggtggtcgacatcggccccggcgcgggcgagcacggcggc
aaggtcgtgcacagcggcacctacaaggagctgctgaagaacaaggagtcgatcaccggc
gcgtacctggcggggcgcaaggagatccccatgcccgccgcccgccgcaaggtcgacaag
aagcggcagctcaccgtagtcggcgcgcgcgagcacaacctgcgcggcatcgacgtgtcg
ttcccgctcggctgcctcgtctcggtcaccggcgtgtccggctccggcaagtccacgctc
gtcaacgacatcctcgcgaccgtgctggcgaacaagctcaacggcgcgcggcaggtcccg
ggcaggcacacacgcgtgcgcggactggaccaggtcgacaagctcgtgcaggtcgaccag
tcgccgatcggccgcaccccgcggtccaacccggccacctacaccggtgtgttcgaccac
atccgcaagctgttcgcggccaccaccgaggcgaaggtgcgcggctaccagccgggccgg
ttctcgttcaacgtcaagggcgggcgctgcgaggcgtgcgcgggcgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtgccgtgcgaggtgtgcaagggcgcccgg
tacaaccgcgagaccctggaagtgcactacaagggcaagacgatctccgaggtcctcgac
atgccgatcgaggaggcggcgacgttcttcgagccgatcaacgccatccaccggcacctg
cgcacgttggtcgacgtcggtctcgggtacgtgcggctgggccagcccgcgcccaccctg
tccggcggtgaggcgcagcgggtgaagctcgcggcggagctgcagaagcggtccaccggc
aagaccgtctacatcctcgacgaacccaccacgggcctgcacttcgaggacatccgcaaa
ctgctcggcgtgatcaacggcctggtcgacaagggcaacacggtgatcgtgatcgagcac
aacctcgacgtgatcaagacgtcggactggctggtcgacatgggcccggaaggtgggtcc
ggcggcggcatggtggtggccgagggcaccccggaacaggtcgccgacgtcaccgacagc
tacacgggccaattcctccgcgaagccctccccgccgaagccgccgtgagctga
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