Saccharothrix sp. 6-C: IOD16_27515
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Entry
IOD16_27515 CDS
T09941
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03030
DNA replication
sacx03410
Base excision repair
sacx03420
Nucleotide excision repair
sacx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IOD16_27515 (polA)
03410 Base excision repair
IOD16_27515 (polA)
03420 Nucleotide excision repair
IOD16_27515 (polA)
03440 Homologous recombination
IOD16_27515 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacx03032
]
IOD16_27515 (polA)
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_27515 (polA)
Enzymes [BR:
sacx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IOD16_27515 (polA)
DNA replication proteins [BR:
sacx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IOD16_27515 (polA)
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IOD16_27515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IOD16_27515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF5723
Motif
Other DBs
NCBI-ProteinID:
QQQ74857
LinkDB
All DBs
Position
complement(6566151..6568826)
Genome browser
AA seq
891 aa
AA seq
DB search
MSTSEASRLLLVDGHSMAYRAFFALPKENFQTGTGQTTNAVYGFTSMLINLLRDEKPTHI
AVAFDVSRKTFRTEAYAEYKAGRSETPDEFRGQVSLIEDVLGTLNVPVLSKASYEADDLI
ATLTTQATALGFEVLICTGDRDALQLVTDKVTVLYPVKGVSEMARYTPELVLEKQGVPPE
LYADYAAVRGDSSDNLPNTPGVGPKTIVKLLTQFGSLNGLVDHVDEVPGKVGDALRANLA
NIMLNRQLTELVRDVELPLGPAELEARPWDRDAVHRLFDELEFRVLRDRLFSTLPTAEPE
AEEGFTVSGGPVPVGGVAAWLDAHARSGRVGIAFRASGGDLEGLALAAVGGEGGYFEVAS
LTEADENALAAWLADESVAKAAHDLKLPLRALRARGWKLRGVSSDTALAAYLVRPGQRSF
ALDDLALRYLQRELRAEEPDDGQLSLLADEEEERQKTAQAAIVRAFAVAELADALDVELV
NTGQESLLASLELPLMVVLDDVEAVGIAIDTEHLAALEAHFAAGVKQAAQDAYSVIGKEI
NLGSPKQLQTVLFDELNMPKTKKTKTGYTTDADALQNLFESTEHPFLQHLLAHRDVTRLK
STVDGLLKSVADDGRIHTTFHQTIAATGRLSSTDPNLQNIPIRTDEGRRIREAFVVGPGY
AELMTADYSQIEMRIMAHLSEDAGLIEAFRSGEDLHTFVASRAFSVPTSEVTAEQRRRVK
AMSYGLAYGLSEYGLAQQLRISAAEAREQKEAYFARFGGVRDYLHAVVEDARKKGYTETI
LGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLGVFRALEESGLRSRMLL
QVHDELVLEIAEGEREQVEALVRAEMGGAYRLSVAMEVSVGVGRSWDAAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacttcagaagcctcccgcctgctgctggtcgacggtcactccatggcctaccgc
gccttcttcgcgctgcccaaggagaacttccagacgggcacgggccagaccaccaacgcg
gtctacggcttcacgtcgatgctcatcaacctgctgcgcgacgagaagcccacgcacatc
gcggtggcgttcgacgtctcgcgcaagaccttccgcaccgaggcctacgcggagtacaag
gccgggcgcagcgagacgccggacgagttccgcggccaggtcagcctcatcgaggacgtg
ctgggcacgctgaacgtgccggtgctgtccaaggccagctacgaggccgacgacctgatc
gccacgctcaccacgcaggccacggcgctgggcttcgaggtgctgatctgcaccggcgac
cgcgacgccctgcaactggtcacggacaaggtgacggtgctgtacccggtcaagggcgtg
tccgagatggcccggtacacccccgagctggtgctggagaagcagggcgtgccgcccgag
ctgtacgccgactacgcggcggtgcgcggcgactcgtcggacaacctgccgaacacgccc
ggcgtcggcccgaagaccatcgtgaagctgctcacccagttcggctcgctcaacggcctg
gtcgaccacgtcgacgaggtgccgggcaaggtcggcgacgcgctgcgggcgaacctggcc
aacatcatgctgaaccggcagctcaccgagctggtgcgggacgtggagctgccgctgggc
ccggccgagctggaagccaggccgtgggaccgcgacgccgtgcaccggctgttcgacgag
ctggagttccgggtgctgcgggaccggctgttctccaccctgcccaccgccgagccggag
gccgaggagggcttcacggtcagcggcggcccggtgccggtcggcggggtggccgcgtgg
ctcgacgcgcacgcgcgctcgggccgggtcggcatcgcgttccgcgcctcgggcggcgac
ctggagggcctggcgctggccgcggtcggcggcgagggcgggtacttcgaggtcgcgtcg
ctgaccgaggccgacgagaacgcgctggccgcgtggctggccgacgagtcggtggccaag
gcggcgcacgacctgaagctgccgctgcgggccctgcgggcgcgcggctggaagctgcgc
ggggtgagcagcgacacggcgctggccgcctacctggtgcggccgggccagcggtcgttc
gcgctggacgacctggcgttgcgctacctccagcgcgagctgcgggccgaggagcccgac
gacgggcagctgtcgctgctggccgacgaggaggaggagcggcagaagaccgcgcaggcg
gcgatcgtgcgggcgttcgcggtggcggagctggccgacgcgctggacgtggagctggtg
aacaccggtcaggagtcgctgctggcgagcctcgagctgccgctgatggtggtgctcgac
gacgtcgaggcggtcggcatcgcgatcgacaccgagcacctcgcggcgttggaggcgcac
ttcgcggcgggcgtgaagcaggccgcgcaggacgcgtactcggtgatcggcaaggagatc
aacctcggctcgcccaagcagctgcagacggtgctgttcgacgagctgaacatgccgaag
acgaagaagaccaagaccgggtacaccaccgacgcggacgcgttgcagaacctgttcgag
tcgaccgagcacccgttcctgcagcacctgctcgcgcaccgggacgtgacccggttgaag
tcgaccgtggacgggctgctcaagtcggtggccgacgacggccgcatccacaccacgttc
caccagacgatcgcggccaccggccggctgtcgtccaccgacccgaacctgcagaacatc
ccgatccgcaccgacgagggccggcgcatccgcgaggcgttcgtggtcgggccgggctac
gccgagctgatgaccgcggactacagccagatcgagatgcggatcatggcccacctgtcg
gaggacgcgggcctgatcgaggcgttccgcagcggcgaggacctgcacacgttcgtcgcg
tcgcgcgcgttctccgtgccgacctcggaggtcaccgccgagcagcgccgccgggtgaag
gccatgtcgtacgggctggcgtacgggctgtcggagtacgggctggcgcagcagctgcgg
atctcggcggccgaggcgcgggagcagaaggaggcgtacttcgcccggttcggcggggtg
cgcgactacctgcacgcggtggtcgaggacgcgcggaagaagggctacaccgagacgatc
ctcggccgccggcgctacctgcccgacctgaccagcgacaaccggcagcgccgggagatg
gccgagcggatggcgttgaacgcgccgatccagggcagcgcggcggacatcatcaaggtc
gcgatgctgggcgtgttccgcgcgctggaggagtcgggcctgcggtcgcggatgctgctg
caggtgcacgacgaactggtgctggagatcgccgagggcgagcgcgagcaggtggaggcg
ctggtccgcgccgagatgggcggcgcttaccggctgtcggtggcgatggaggtctcggtc
ggcgtcggccggtcctgggacgcggccgcgcactga
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