Saccharothrix sp. 6-C: IOD16_28610
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Entry
IOD16_28610 CDS
T09941
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00470
D-Amino acid metabolism
sacx00550
Peptidoglycan biosynthesis
sacx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IOD16_28610 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IOD16_28610 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sacx01011
]
IOD16_28610 (murD)
Enzymes [BR:
sacx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IOD16_28610 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sacx01011
]
Precursor biosynthesis
Amino acid ligase
IOD16_28610 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
NAD_binding_7
Sacchrp_dh_NADP
AdoHcyase_NAD
Shikimate_DH
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QQQ80858
LinkDB
All DBs
Position
complement(6802097..6803461)
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AA seq
454 aa
AA seq
DB search
MGFLAGRHVLVAGAGVTGRSAAEALLAADAVVTVTDGSADRLAALEQLLPGVTLTPGLVT
PPDGTDLVVTSPGWRPSSPLLEAATAAGIEVIGEVELAWRMGLELADPPTWLAVTGTNGK
TTTVGMLESILRAAGIDAVACGNVGLPVVDALLAGRRVLAVELSSFQLHWSPSVRPFAGV
LLNLAEDHLDWHGTFEAYASAKAGVLTGEVAVGGVDDPVVADLLASSPAATHVGFTLGSP
EEGQLGVHDGQLVDRAFGQADEVLLPVADVHPGGPPGIADALAAAALARAHGVPADAVAR
GLRDFKPGAHRAVLVTTVDGVAYVNDSKATNPHAAAASLRSHDSVVWVAGGLLKGASVDE
LVRDEAHRLRGAVLIGADREVIASALARHAPSVPVVVLDDGSMADAVREARSLAKPGDAV
VLAPAAASMDMFTDYAHRGQSFADAVLGLVGQAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctcgcaggtcgtcacgtgctcgtggccggcgccggcgtgaccggccggtcg
gcggcggaggcgttgctggcggccgacgccgtcgtcaccgtgaccgacggctcggccgac
cgcctcgcggcgctggagcagctgctgcccggggtgacgctgacacccggcctggtcacc
ccacccgacgggaccgacctggtcgtcaccagcccggggtggcgtccgtccagcccgttg
ctggaggcggcgacggcggcgggcatcgaggtgatcggcgaggtcgagctggcctggcgg
atgggcctggagctggccgacccgccgacgtggctggccgtgaccgggacgaacggcaag
accaccacggtcgggatgctggagtcgatcctgcgggcggccggcatcgacgccgtggcg
tgcggcaacgtcggcctgcccgtggtggacgccctgctggccggtcggcgggtgctggcg
gtggagctgtcgagcttccagctgcactggtcgccgtccgtgcggccgttcgccggggtg
ctgctgaacctggccgaggaccacctcgactggcacggcacgttcgaggcgtacgcgtcg
gcgaaggccggtgtgctgaccggcgaggtcgccgtgggcggggtggacgaccccgtggtg
gcagacctgctggcctcgtccccggccgcgacgcacgtcgggttcaccctcgggtcgccg
gaggagggccagctcggcgtccacgacggccagttggtcgaccgggcgttcgggcaggcc
gacgaggtgctgctgcccgtcgccgacgtccaccccggcgggccgcccggcatcgcggac
gcgttggcggcggcggccctggcccgtgcgcacggcgtgcccgccgacgcggtggcgcgc
gggttgcgcgacttcaagcccggggcgcaccgggccgtgctggtgacgacggtcgacggc
gtcgcctacgtcaacgactcgaaggccaccaacccccacgcggcggcggcgtcgctgcgg
tcgcacgacagcgtggtgtgggtggccggtgggctgctcaagggcgcgtcggtggacgag
ctggtgcgtgacgaggcccaccggctgcgcggggcggtgctgatcggcgcggaccgcgag
gtgatcgcgtcggcgttggcccggcacgcgccgtccgtgcccgtggtggtgctggacgac
gggtccatggccgacgccgtgcgcgaggcccgttcgctggcgaagccgggggacgccgtg
gtgctcgccccggctgccgcgtcgatggacatgttcaccgactacgcccaccgggggcag
tcgttcgccgatgccgtgctgggcctggtcggtcaggccgggtag
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