Saccharothrix sp. 6-C: IOD16_29050
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Entry
IOD16_29050 CDS
T09941
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IOD16_29050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sacx01007
]
IOD16_29050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacx03016
]
IOD16_29050
Enzymes [BR:
sacx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
IOD16_29050
Amino acid related enzymes [BR:
sacx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IOD16_29050
Transfer RNA biogenesis [BR:
sacx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IOD16_29050
Prokaryotic type
IOD16_29050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
Peptidase_C24
Motif
Other DBs
NCBI-ProteinID:
QQQ75125
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All DBs
Position
complement(6888050..6889795)
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AA seq
581 aa
AA seq
DB search
MITRMSSLFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGGYSWLPLGLRVLRNIEQVVR
DEMDAFGAQEIQFPALLPKEPYEATNRWTEYGPNLFRLKDRKGADYLLGPTHEELFALTV
KGEYSSYKDYPVTLYQIQTKYRDEARPRAGILRGREFLMKDSYSFDLADEGLAQSYQRHR
EAYIRIFERLGLEYVIVSATSGAMGGSASEEFLAVAPTGEDTFVRSTESDYAANVEAVVT
PAPPEQDPAAHPAAQVHHTPNTPTIKTMVDYLNANTDRTFTAADTLKNFLVKTRKPGEQD
WTLLAIGLPGDREVDLKRLEAAVEPAEVAMLEDADFARNSFLVKGYIGPAAVQANGVRYL
VDPRVVRGTAWVTGADKADHHVVDLVCGRDFTPDGTIDVAEVREGDASPDGRGSLVSARG
IEIGHIFQLGRKYADAFALDALGPDSKPIRITMGSYGIGVSRLVAVIAEQSHDDRGLIWP
RNVAPADVHVVVAGKDEALLAGGEKLAGELSAAGVKVLLDDRKASPGVKFADAELIGVPT
ILVVGRGLANGLVEVKDRRTGEREEVPVADAVQHLLGVVKG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgaggatgtcgtcgctgttcctgcgcacgctgcgcgaggacccggcggacgcc
gaagtacccagccacaagctgctggtccgcgccggctacgtgcgccgcgtcgcgccgggc
ggttactcgtggctgccgctggggctgcgggtgctgcgcaacatcgagcaggtcgtgcgc
gacgagatggacgccttcggcgcgcaggagatccagttccccgcgctgctgccgaaggag
ccctacgaggcgacgaaccggtggaccgagtacgggcccaacctgttccgcctcaaggac
cgcaagggcgccgactacctgctcggccccacgcacgaggagctgttcgcgctcacggtg
aagggcgagtactcctcctacaaggactacccggtcacgctctaccagatccagacgaag
taccgggacgaggcgcgtccccgcgcgggcatcctgcggggccgcgagttcctgatgaag
gactcctactccttcgacctcgccgacgagggcctggcgcagtcctaccagcggcaccgc
gaggcctacatccgcatcttcgagcggctcgggctggagtacgtcatcgtctccgccacg
tcgggcgcgatgggcggctcggcgtcggaggagttcctggcggtcgcgccgaccggcgag
gacaccttcgtccgcagcacggagtcggactacgcggcgaacgtggaagccgtcgtcacg
cccgcgccccccgagcaggacccggcggcccaccccgcggcgcaggtgcaccacacgccg
aacacgccgaccatcaagacgatggtcgactacctgaacgccaacaccgaccgcaccttc
accgccgcggacacgctgaagaacttcctcgtcaagaccaggaagcccggcgagcaggac
tggacgctgctggccatcggcctgcccggcgaccgcgaggtcgacctcaagcgcctggag
gcggcggtcgagcccgccgaggtcgcgatgctggaggacgcggacttcgcccgcaactcc
ttcctggtcaagggctacatcggcccggcggcggtccaggccaacggggtgaggtacctg
gtcgacccgcgcgtggtgcgcggcacggcgtgggtgaccggcgcggacaaggccgaccac
cacgtggtggacctggtctgcggccgcgacttcaccccggacggcacgatcgacgtggcc
gaggtccgcgagggcgacgcgtcgccggacggcaggggctcgctggtgtccgcgcgcggc
atcgagatcgggcacatcttccagctgggccgcaagtacgcggacgcgttcgcgctggac
gcgctcggccccgacagcaagcccatccggatcaccatgggctcctacggcatcggcgtg
tcccgcctggtggccgtgatcgccgagcagagccacgacgaccgcggcctgatctggccg
cgcaacgtcgcgcccgccgacgtgcacgtggtcgtcgcgggcaaggacgaggcgctgctc
gcgggcggcgagaagctggcgggcgagctgtccgcggcgggcgtgaaggtgctgctggac
gaccgcaaggcgagcccgggcgtgaagttcgccgacgccgagctgatcggcgtgccgacg
atcctggtggtcggccgcggcctggccaacggcctggtcgaggtcaaggaccgccgcacg
ggcgagcgcgaagaggtgccggtcgccgacgcggtccagcacctgctgggcgtcgtcaag
ggctga
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