Saccharothrix sp. 6-C: IOD16_29605
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Entry
IOD16_29605 CDS
T09941
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sacx03036
]
IOD16_29605 (smc)
Chromosome and associated proteins [BR:
sacx03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IOD16_29605 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
QQQ75225
LinkDB
All DBs
Position
complement(6999151..7002855)
Genome browser
AA seq
1234 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK
MEDVIFAGTSGRAPLGRAEVTLTIDNSDGALPIDYVEVSITRRMFREGATEYEINGNSCR
LMDIQELLSDSGIGREMHVIVGQGQLAAILESKPEERRAFVEEAAGVLKHRKRKEKALRK
LEAMQANLTRLTDLTAELRRQLKPLGKQAEIARRAQAVQSELRDARMRLLADDLVTQREA
LAREEQDEAVARARRTEVEKSLQQAQFQQNELEDQVAADAPKLQQAQDTWYRLSALEERL
RGTVRLAVERERHLSAAVDAPRGGRDPDELEAEAEQTAELEQELQDGVTEARVGLAEAVE
TRAELERVVSAAEKAHLAAVRAIADRREGLARLSGQVEALRSKTSATAEEIERMSVALAE
AVERSEVVQQELAEAREVTGTEDEDDVGLDERHRLAAESDDAARRRVEELVKAERTAERD
IASWQARVDALSLGLTRKDGAGALLASRLPGLLGSVAALLTVEPGAEVALAAALGPIADA
VAVASGADAVAALELLKEQDTGRAGVLVGGAPVSVDRSGWPSLPPDARWAVDVVQAPEPL
RPALHRALDKVVVVDSLATARGLVDAHPSVRAVTRDGDVLGADWAVGGSGRSQSVIEVQA
AVDEASEKLALAERALEQSTAALEGARAEQQARRAEVAAVKEQLNEAKVRRARSSERLNR
LAAAVRSAEAEVERVRAQRAKVEAAREENLLKLGELEERLLVAEEQPLDDEPDSSHRDEL
AAELAAARQGEVDARLSLRTAEERARALQGKAEGLRRAARAEREARERAQRAHAARARGA
VVAKAVVRGGEVALERIAASLSRAAAERDAAQERKSRRETYLAQVRNLVREMSVELEKLT
DAVHRDEVLRAEQRMRIEQLETKVAEEFGIGLEDLVAEYGPDVFIPPSPQEMAEYEVAKE
RGEAVTAPQPIPYDRDTQARRAKRAERDLSLLGKVNPLALEEFAALEERYKFLSNQLEDI
KATRRDLLTVVKEVDDKILEVFTSAYEDVAREFEVVFKVLFPGGEGRLVLTEPDDMLTTG
IELEARPPGKKVKRLSLLSGGEKSLAAVAMLVAIFRARPSPFYVMDEVEAALDDTNLHRL
ISLFEQLREHSQLLIITHQKPTMEIADALYGVSMRGDGISQVISQRLRGEDKPKRAKPAA
VAAAPPAATTAAPEPAAPEPAAATPETGPPAASD
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaagagcctgacgctgaaggggttcaagtccttcgcctcggctaccacgctg
cgcttcgagcccggcatcacctgcgtcgtcggtccgaacgggtccggcaagtcgaacgtg
ctcgacgcgctgcgctgggtcatgggcacgcagggcgcgaaggacctgcgcggcggcaag
atggaggacgtcatcttcgccggcacgtccggccgcgcgccgctgggccgcgccgaggtg
acgctgaccatcgacaactccgacggcgcgctgccgatcgactacgtcgaggtgtcgatc
acccgccggatgttccgcgagggcgccaccgagtacgagatcaacggcaactcgtgccgg
ttgatggacatccaggaactgctcagcgactccggcatcggccgcgagatgcacgtgatc
gtcggccagggccagctcgccgcgatcctggagtccaagcccgaggagcggcgcgcgttc
gtcgaggaggccgcgggcgtcctgaagcaccgcaagcgcaaggagaaggcgctgcggaag
ctggaggcgatgcaggcgaacctgacccgcctcaccgacctcaccgccgagctgcgccgc
cagctcaagccgctgggcaagcaggccgagatcgcgcgccgcgcgcaggccgtgcagtcg
gagctgcgcgacgcccggatgcgcctgctggccgacgacctggtgacgcagcgcgaggcg
ttggcgcgcgaggagcaggacgaggccgtcgcccgggcccggcgcaccgaggtcgagaag
tcgctgcaacaggcccagttccagcagaacgagctggaggaccaggtcgcggccgacgcg
ccgaagctccagcaggcccaggacacctggtaccggctgtcggcgttggaggaacggctg
cgcggcaccgtgcggctggccgtggaacgggagcggcacctgtcggcggcggtcgacgcg
ccgcgcggcgggcgtgacccggacgagctggaagccgaggccgagcagaccgcggagctg
gagcaggagctccaggacggcgtgaccgaggcccgggtggggctggcggaggccgtggag
acgcgggccgagctggaacgcgtggtgtccgcggcggagaaggcgcacctggccgcggtg
cgggcgatcgcggaccggcgcgaaggcctggcccggctgtccggccaggtggaggcgctg
cggtcgaagacgagcgcgaccgccgaggagatcgagcggatgtccgtcgcgctggccgag
gcggtcgagcggtcggaggtcgtgcagcaggagctggccgaggcccgcgaggtgaccggg
accgaggacgaggacgacgtcgggctcgacgagcggcaccggctggccgccgagtcggac
gacgccgcgcgccgccgggtcgaggagctggtcaaggccgagcggaccgccgagcgggac
atcgcgtcgtggcaggcgcgcgtggacgcgctgtcgttgggcctgacccgcaaggacggc
gcgggcgcgttgctggcgtcgcggctgccggggttgctcgggtcggtcgcggcgctgctg
accgtggagccgggcgcggaggtcgcgctggcggcggcgctgggcccgatcgcggacgcg
gtcgcggtggcctccggcgcggacgcggtggcggcgctggagctgttgaaggagcaggac
accggtcgggccggggtgctggtcggcggcgcgccggtgagcgtcgaccggtccggatgg
ccgtcgttgccgccggacgcgcggtgggcggtggacgtggtgcaggcgccggagccgctg
cggcccgcgctgcaccgcgcgttggacaaggtcgtggtggtcgactcgctggccacggcg
cgcggcttggtggacgcgcacccgtcggtgcgcgcggtgacccgtgacggcgacgtgctc
ggcgcggactgggcggtcggcgggtccgggcgcagccagagcgtcatcgaggtccaggcc
gcggtggacgaggcgtcggagaagctggcgctggcggagcgcgcgctggagcagtccacg
gccgccctggaaggcgcacgggccgagcagcaggcacggcgggccgaggtcgccgcggtg
aaggagcagctcaacgaggccaaggtgcggcgcgcccggtcgtcggagcggctgaaccgg
ctggccgcggcggtgcgctcggccgaggccgaggtggagcgcgtgcgggcgcagcgggcg
aaggtcgaggcggcccgcgaggagaacctgctcaagctcggcgagctggaagaacgcctg
ctggtggcggaggagcagccgctggacgacgagccggacagctcccaccgcgacgagctg
gccgccgagctggccgccgcgcgccagggggaggtcgacgcccggctgtcgctgcggacc
gccgaggaacgcgctcgcgccttgcagggcaaggcggaagggctccggcgggccgcacgg
gcggaacgtgaggcgcgggaacgcgcccagcgcgcccacgccgcccgggcccggggcgcg
gtcgtggcgaaggccgtggtgcgcggtggcgaggtcgcgctggagcggatcgccgcgtcg
ttgagccgggcggccgcggagcgggacgcggcgcaggagcgcaagtcgcggcgcgagacg
tacctggcgcaggtgcgcaacctcgtccgcgagatgtcggtggagctggagaagctgacc
gacgccgtgcaccgcgacgaggtgctgcgggccgagcagcggatgcgcatcgagcagctg
gagaccaaggtcgccgaggagttcggcatcggcctggaggacctggtcgccgagtacggc
ccggacgtgttcatcccgccgtcgccgcaggagatggccgagtacgaggtggcgaaggag
cgcggcgaggcggtgaccgcgccgcagccgatcccgtacgaccgggacacgcaggcgcgg
cgggccaagcgcgccgagcgggacctgtcgctgctgggcaaggtcaacccgttggcgctg
gaggagttcgcggcgctggaggagcggtacaagttcctgtccaaccagctggaggacatc
aaggcgacgcggcgcgacctgctgaccgtggtgaaggaggtcgacgacaagatcctggag
gtcttcacgtcggcctacgaggacgtcgcccgcgagttcgaggtcgtgttcaaggtgctg
ttccccggcggcgaggggcggttggtgctgaccgagccggacgacatgctgaccaccggc
atcgagctggaagcccggccgccgggcaagaaggtcaagcggctgtcgctgctgtcgggt
ggcgagaagtcgctggcggccgtggcgatgctggtcgccatcttccgcgcccgcccgtcg
ccgttctacgtgatggacgaggtcgaagcggccttggacgacaccaacctgcaccggctg
atcagcctgttcgagcagctgcgcgagcactcgcagctgctgatcatcacgcaccagaag
ccgacgatggagatcgccgacgcgctgtacggcgtctccatgcgcggtgacggcatcagc
caggtgatctcccaacgcctgcggggcgaggacaagccgaaacgcgccaaacccgccgcc
gtggccgccgctccaccggccgccaccaccgccgctccggaacccgccgctccggaaccc
gccgccgctactcctgagaccggaccgcccgccgcctccgactag
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