Saccharothrix sp. 6-C: IOD16_29740
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Entry
IOD16_29740 CDS
T09941
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IOD16_29740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_29740
Enzymes [BR:
sacx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IOD16_29740
DNA repair and recombination proteins [BR:
sacx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IOD16_29740
Prokaryotic type
IOD16_29740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6139
Motif
Other DBs
NCBI-ProteinID:
QQQ75252
LinkDB
All DBs
Position
complement(7027558..7028232)
Genome browser
AA seq
224 aa
AA seq
DB search
MARPLEEIMEAGWAAALAPVADRIAAMGEFLRAEVAAGRTYLPAGENVLRAFQQPFHSVR
VLIVGQDPYPTPGHAVGLSFSVSPETRPIPKSLVNIYTEYVADLGHPKPSNGDLTPWTER
GVLLLNRALTVQPGKSNSHRNKGWEPVTEQAIKALAERDAPLVAILWGSQARALKPLLGA
DRCVESVHPSPLSAAGGFFGSRPFSKVNELLVKQGAEPIDWKLP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgtccgcttgaagagatcatggaagccggctgggccgcggcactcgcgcccgtg
gccgatcgcatcgccgcgatgggcgagttcctgcgggcggaggtggccgccgggcggacc
tacctgcccgccggggagaacgtgctgcgggcgttccagcagccgttccactccgtgcgg
gtgctgatcgtcggccaggacccgtacccgacgccggggcacgcggtggggctgagcttc
tcggtgtcgccggagacccggcccatcccgaagagcctggtcaacatctacaccgagtac
gtggccgacctggggcaccccaagccctccaacggcgacctgacgccctggaccgagcgc
ggcgtgctgctgctcaaccgggcgttgacggtgcagccgggcaagtcgaactcccaccgc
aacaagggctgggagccggtgaccgagcaggcgatcaaggcactggccgagcgggacgcg
ccgctggtcgcgatcctgtggggcagccaggcgcgggccctcaagccgctgctgggcgcc
gaccgctgcgtggagtcggtccacccgagcccgctgtccgcggccggcggcttcttcggc
tcgcggccgttcagcaaggtcaacgagctgctggtgaagcagggcgccgagccgatcgac
tggaagctgccctga
DBGET
integrated database retrieval system
