KEGG   Saccharothrix sp. 6-C: IOD16_29825
Entry
IOD16_29825       CDS       T09941                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sacx  Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:sacx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sacx03032]
    IOD16_29825
   03036 Chromosome and associated proteins [BR:sacx03036]
    IOD16_29825
   03400 DNA repair and recombination proteins [BR:sacx03400]
    IOD16_29825
DNA replication proteins [BR:sacx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    IOD16_29825
Chromosome and associated proteins [BR:sacx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    IOD16_29825
DNA repair and recombination proteins [BR:sacx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      IOD16_29825
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QQQ75268
LinkDB
Position
complement(7042512..7043225)
AA seq 237 aa
MNKAQLIEALAERLGDKKNAAAAVDGIVDVIVRSVHKGEKVNITGFGVFEKRARAARTAR
NPRTGETVKVKKTNVPAFRAGSTFKDVISGTKKLPRVTAAKPAAAGAAAKPAAATKAPAT
RSTTARTTTARATRSTGTATRAAAAATKAPATRRTAAAAKPAATATKAAPAKSTATKATA
AKATTAKATTATAAKPAAAKKATTAKATTAKATTAKATTAAAAKPAAAAKKAPAKKK
NT seq 714 nt   +upstreamnt  +downstreamnt
gtgaacaaggcccagctcatcgaggcgctcgccgagcgccttggcgacaagaagaacgcc
gctgccgctgtcgacggcatcgtcgacgtcatcgtccgcagcgtccacaagggcgagaag
gtcaacatcaccggtttcggtgtcttcgagaagcgcgcccgtgcggcacgcaccgctcgc
aacccgcgcaccggtgagaccgtgaaggtcaagaagaccaacgtgcccgcgttccgcgcg
ggttcgacgttcaaggacgtcatcagcggcacgaagaagctgccgcgcgtgacggccgcc
aagcccgccgccgccggtgcggcggccaagccggccgctgccaccaaggcgccggcgacc
cgcagcaccaccgctcgtaccaccactgcgcgcgcgacgcgcagcaccggtacggccacg
cgtgcggctgcggcagccaccaaggcgccggcgacccgccggaccgccgcggctgcgaag
cccgccgccaccgccaccaaggccgcgcctgccaagagcaccgcgaccaaggccaccgcc
gcgaaggcgacgacggcgaaggcgacgacggcgaccgcggccaagcccgcggcggcgaag
aaggccaccacggcgaaggccaccacggcgaaggcgacgacggcgaaggccaccacggcc
gcagccgcgaagccggcggccgcggcgaagaaggccccggccaagaagaagtga

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