Saccharothrix sp. 6-C: IOD16_29825
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Entry
IOD16_29825 CDS
T09941
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacx03032
]
IOD16_29825
03036 Chromosome and associated proteins [BR:
sacx03036
]
IOD16_29825
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_29825
DNA replication proteins [BR:
sacx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IOD16_29825
Chromosome and associated proteins [BR:
sacx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IOD16_29825
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IOD16_29825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QQQ75268
LinkDB
All DBs
Position
complement(7042512..7043225)
Genome browser
AA seq
237 aa
AA seq
DB search
MNKAQLIEALAERLGDKKNAAAAVDGIVDVIVRSVHKGEKVNITGFGVFEKRARAARTAR
NPRTGETVKVKKTNVPAFRAGSTFKDVISGTKKLPRVTAAKPAAAGAAAKPAAATKAPAT
RSTTARTTTARATRSTGTATRAAAAATKAPATRRTAAAAKPAATATKAAPAKSTATKATA
AKATTAKATTATAAKPAAAKKATTAKATTAKATTAKATTAAAAKPAAAAKKAPAKKK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccagctcatcgaggcgctcgccgagcgccttggcgacaagaagaacgcc
gctgccgctgtcgacggcatcgtcgacgtcatcgtccgcagcgtccacaagggcgagaag
gtcaacatcaccggtttcggtgtcttcgagaagcgcgcccgtgcggcacgcaccgctcgc
aacccgcgcaccggtgagaccgtgaaggtcaagaagaccaacgtgcccgcgttccgcgcg
ggttcgacgttcaaggacgtcatcagcggcacgaagaagctgccgcgcgtgacggccgcc
aagcccgccgccgccggtgcggcggccaagccggccgctgccaccaaggcgccggcgacc
cgcagcaccaccgctcgtaccaccactgcgcgcgcgacgcgcagcaccggtacggccacg
cgtgcggctgcggcagccaccaaggcgccggcgacccgccggaccgccgcggctgcgaag
cccgccgccaccgccaccaaggccgcgcctgccaagagcaccgcgaccaaggccaccgcc
gcgaaggcgacgacggcgaaggcgacgacggcgaccgcggccaagcccgcggcggcgaag
aaggccaccacggcgaaggccaccacggcgaaggcgacgacggcgaaggccaccacggcc
gcagccgcgaagccggcggccgcggcgaagaaggccccggccaagaagaagtga
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