Saccharothrix sp. 6-C: IOD16_32260
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Entry
IOD16_32260 CDS
T09941
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00521
Streptomycin biosynthesis
sacx00523
Polyketide sugar unit biosynthesis
sacx00525
Acarbose and validamycin biosynthesis
sacx00541
Biosynthesis of various nucleotide sugars
sacx01055
Biosynthesis of vancomycin group antibiotics
sacx01100
Metabolic pathways
sacx01110
Biosynthesis of secondary metabolites
sacx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IOD16_32260 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IOD16_32260 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IOD16_32260 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IOD16_32260 (rfbB)
00525 Acarbose and validamycin biosynthesis
IOD16_32260 (rfbB)
Enzymes [BR:
sacx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IOD16_32260 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
QQQ75704
LinkDB
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Position
complement(7555111..7556103)
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AA seq
330 aa
AA seq
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MRVLVTGGAGFIGSHYVREMVAGAYPAYADAEVVVLDKLTYAGNEANLAPVANDPRLTFV
RGDICDRELVADLMSRTDVVVHFAAESHVDRSISGSADFVLTNVLGTQTLLQGALEAGVA
KFVHVSTDEVYGTIDEGSWTEDHVLEPNSPYSASKASSDLLARSFFRTHGLPVCITRCSN
NYGPYQFPEKVIPLFVTNLVDGKKVPLYGDGLNVRDWLHVDDHCRGIQLVLEGGRGGEIY
NIGGGTELTNRDLTERLLAATGRDWDSFVEPVTDRKGHDRRYSVDITKISTELGYAPRVD
FAEGLASTVQWYRDNRSWWEPLKQRAALAG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtactggtaacgggtggggccgggttcatcggttcgcactacgtgcgggagatg
gtggccggcgcgtacccggcctacgccgatgccgaggtggtggtgctggacaagctcacc
tacgccggcaacgaggcgaacctggcgccggtcgcgaacgatccgaggctgaccttcgtc
cgcggcgacatctgcgaccgcgagctggtcgcggacctgatgagccggacggacgtggtg
gtgcacttcgccgccgagtcccatgtggaccgctcgatctccggttcggccgacttcgtg
ctgaccaacgtgctcggcacccagacgctgctgcagggcgcgctggaggcgggggtggcc
aagttcgtgcacgtctcgaccgacgaggtctacggcacgatcgacgagggttcctggacc
gaggaccacgtcctggagccgaactcgccctactcggcgtccaaggcgtcgtcggacctg
ctggcgaggtcgttcttccgcacccacgggttgccggtgtgcatcacccggtgctcgaac
aactacggtccgtaccagttccccgagaaggtcatccccctgttcgtcaccaacctggtc
gacggcaagaaggtgccgctgtacggcgacggcctcaacgtccgcgactggctgcacgtg
gacgaccactgccggggcatccagctcgtcctcgaaggcgggcgcggcggtgagatctac
aacatcggcggcggcaccgagctgaccaaccgcgacctgaccgagcgcctgctggcggcc
accgggcgtgactgggactcgttcgtggagcccgtcaccgaccgcaagggccacgaccgg
cgctactcggtggacatcaccaagatcagcaccgagctgggctacgcgccgcgcgtcgac
ttcgccgagggcctggcctcgaccgtgcagtggtaccgggacaaccggtcgtggtgggag
ccgctcaagcagcgcgcggccctggcgggctga
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