Saccharothrix sp. 6-C: IOD16_32840
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Entry
IOD16_32840 CDS
T09941
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00020
Citrate cycle (TCA cycle)
sacx00190
Oxidative phosphorylation
sacx00650
Butanoate metabolism
sacx00720
Other carbon fixation pathways
sacx01100
Metabolic pathways
sacx01110
Biosynthesis of secondary metabolites
sacx01120
Microbial metabolism in diverse environments
sacx01200
Carbon metabolism
Module
sacx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sacx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sacx_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IOD16_32840
00650 Butanoate metabolism
IOD16_32840
09102 Energy metabolism
00190 Oxidative phosphorylation
IOD16_32840
00720 Other carbon fixation pathways
IOD16_32840
Enzymes [BR:
sacx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IOD16_32840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
Fusion_gly
FAD_oxidored
GIDA
Motif
Other DBs
NCBI-ProteinID:
QQQ75808
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All DBs
Position
7677761..7679512
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AA seq
583 aa
AA seq
DB search
MQFHKYDVVIIGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RNHGEAAVRRACYAADRTGHMILQTLYQNCVKHGIEFFNEYYVLDICMTETADGPVCTGA
VAYELATGEIHVFQAKSVVFATGGFGKVFKTTSNAHTLTGDGMGIVFRKGLPLEDMEFYQ
FHPTGLAGLGILLTEGARGEGAILRNGSGERFMERYAPTIKDLAPRDIVARSMALEVLEG
RGAGPNKDYVLLDCTHLGAEVLETKLPDITEFARTYLAVDPVTEPVPVYPTAHYAMGGIP
TNVHGEVLRDNDNVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYALA
HDHVDLPENPAAQVEAQVALVLSEHGQERVADIRTELQATMDANASVYRTEDTLKTALHD
VQALKERYQRITVQDKGKRFNTDLLEAVELGFLLELAEVLVVGALARKESRGGHAREDYP
NRDDTNFMRHSMYYKQGDGLAADIRLDYKPVTFTRYQPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtcgtcatcatcggcgcgggtggcgccgggatgcgcgcg
gcgatcgagtccggccagcgcgcccgcacggccgtgctcaccaagctctaccccacgcgt
tcccacacgggcgccgcgcagggcggcatgtgcgccgcgctggcgaacgtggaggaggac
aactgggagtggcacaccttcgacacgatcaagggcggtgactacctggtcgaccaggac
gccgccgagatcatggcgaaggaggccatcgacgcggtcctcgacctggagaagatgggc
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcggcggttcggcggccacacc
cgcaaccacggcgaggcggccgtgcgccgggcgtgctacgcggccgaccgcaccggccac
atgatcctgcagacgctgtaccagaactgcgtcaagcacggcatcgagttcttcaacgag
tactacgtgctcgacatctgcatgaccgagaccgccgacggcccggtgtgcaccggcgcg
gtggcctacgagctggcgaccggcgagatccacgtgttccaggccaagtccgtggtgttc
gccaccggcggcttcggcaaggtcttcaagaccacgtccaacgcgcacacgctcaccggc
gacggcatgggcatcgtgttccgcaagggcctgccgctggaggacatggagttctaccag
ttccacccgaccggtctggcgggcctgggcatcctgttgaccgagggcgcgcgcggtgag
ggcgcgatcctccgcaacggctccggcgagcggttcatggagcgctacgcgccgaccatc
aaggacctcgcgccgcgcgacatcgtggcccggtccatggcgctggaggtgctcgaaggc
cgcggcgccggtccgaacaaggactacgtgctgctggactgcacccacctgggcgcggag
gtgctggagacgaagctccccgacatcaccgagttcgcccgcacgtacctcgcggtcgac
ccggtgaccgagccggtgccggtctacccgaccgcgcactacgcgatgggtggcatcccg
accaacgtgcacggcgaggtgttgcgggacaacgacaacgtcgtgcccggcctctacgcc
gccggcgagtgcgcgtgcgtgtccgtccacggcgcgaaccggctcggcacgaactcgttg
ctggacatcaacgtgttcggccgccgcgcgggcatcgccgccgccgagtacgcgttggcg
cacgaccacgtcgacctgcccgagaaccccgcggcgcaggtcgaggcgcaggtggcgctg
gtgctgtccgagcacggccaggagcgcgtggcggacatccgcaccgagctgcaggccacc
atggacgccaacgcgtcggtgtaccgcaccgaggacacgctcaagacggcgctgcacgac
gtgcaggcgttgaaggagcggtaccagcggatcaccgtgcaggacaaggggaagcggttc
aacaccgacctcctggaagccgtcgagctgggcttcctcctggagctggccgaggttctc
gtcgtgggcgcgctggcgcgcaaggagtcccgcggcggtcacgcgcgcgaggactacccg
aaccgcgacgacacgaacttcatgcgccacagcatgtactacaagcagggcgacggcttg
gcggccgacatccggctcgactacaagcccgtgacgttcacccggtaccagccgatggag
cgcaagtactga
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