Saccharothrix sp. 6-C: IOD16_33165
Help
Entry
IOD16_33165 CDS
T09941
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03420
Nucleotide excision repair
sacx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IOD16_33165 (pcrA)
03430 Mismatch repair
IOD16_33165 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_33165 (pcrA)
Enzymes [BR:
sacx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IOD16_33165 (pcrA)
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IOD16_33165 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
IOD16_33165 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQQ75864
LinkDB
All DBs
Position
complement(7746586..7748928)
Genome browser
AA seq
780 aa
AA seq
DB search
MSALFDLPASPPSSRSAHSPSGRLLEDLNPSQRRAVEHAGAPLLVVAGAGSGKTRVLTRR
IAYLLAERQVHPGEVMAITFTNKAAAEMKERVADLVGARARSMWVSTFHSMCVRVMRREA
KTLGLSSSFSIYDSDDTRRLITLVARDLDLDPKRYPARTLAIHISNLKNELVDAATAKER
ASNDLERRVAEVYESYQRRLGDSNSLDFDDLIMRTVELLQNHPDVAEHYHRRFRHVLVDE
YQDTNHAQYTLVRELIGTGEDGVPPGELCVVGDADQSIYAFRGATIRNIVEFERDYPQAT
TILLEQNYRSTQTILSAANAVISRNPNRRDKRLWSDLGDGEKIVGYVADNEHDEAAFVAR
EIDHLVDGGEANNGEIAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDALAY
LRALSNPDDTVSLRRILNVPKRGIGERAEACVSMYAERERIGFAAALRDAVTGKVPLLNP
RSRNAIAGFVEMMDELGVLVERGDDVADVLEAVLEKTAYRAELEASEDPQDHTRVENLNE
LVTVAREFGDLNTPAPDEVAASDLGDLPSEGSLAAFLERVSLVADADSVPDAESDGVVTL
MTLHTAKGLEYPVVFCTGWEDGVFPHLRALGDPTELAEERRLAYVGITRAQKRLYLSRAL
VRSAWGQPSANPASRFLDEIPADLLDWRRTEPKRSAPSAPTSWGGGRGSGPSRPAPTNAG
WKDTPALKLDVGDRVSHDKYGLGRVVAVDGSGPRATATIDFGGAGTVRLMLIGGVPLVKL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttgttcgacttgcctgcaagtcccccctcctcccggtccgcgcattcccct
tctgggcggctgctcgaagacctcaacccgtcccagcgacgggccgtcgagcacgcgggc
gccccgttgctggtcgtcgcgggtgcgggctccggcaagacgcgcgtgctcacccgccgc
atcgcctacctgctcgccgagcgccaggtccaccccggcgaggtcatggcgatcaccttc
accaacaaggccgccgccgagatgaaggaacgcgtggccgacctggtcggcgcgcgggcc
cgctcgatgtgggtgtccacgttccactcgatgtgcgtgcgggtcatgcgccgcgaggcg
aagaccctcggcctgtcgtccagcttctccatctacgactccgacgacacccgccggctg
atcacgctggtggcgcgggacctcgacctggaccccaagcgctacccggcgcgcacgctg
gcgatccacatctcgaacctgaagaacgagctggtcgacgccgccaccgccaaggagcgc
gcgagcaacgacctggagcgccgcgtcgccgaggtctacgagagctaccagcgccggctc
ggcgactcgaactcgctcgacttcgacgacctgatcatgcggaccgtcgagctgctgcag
aaccacccggacgtggccgagcactaccaccgccggttccggcacgtgctggtcgacgag
taccaggacaccaaccacgcgcagtacacgctggtccgcgagctgatcggcaccggcgag
gacggcgtgccgccgggcgagctgtgcgtggtgggcgacgccgaccagtcgatctacgcc
ttccgcggcgcgacgatccgcaacatcgtggagttcgagcgggactacccgcaggccacc
acgatcctgctggagcagaactaccggtccacccagacgatcctgagcgcggcgaacgcg
gtcatctcgcgcaacccgaaccgccgggacaagcggctgtggagcgacctgggcgacggc
gagaagatcgtcggctacgtcgcggacaacgagcacgacgaggcggcgttcgtcgcccgc
gagatcgaccacctggtggacggcggcgaggcgaacaacggcgagatcgccgtgttctac
cgcaccaacaaccagtcgcgcgtgttcgaggagatcttcatccgcctcggcctgccctac
aaggtggtcggcggcgtccggttctacgagcggcgcgaggtgcgcgacgcgctggcgtac
ctgagggcgttgtccaaccccgacgacacggtgtcgttgcggcgcatcctgaacgtgccc
aagcgcggcatcggcgagcgcgcggaggcgtgcgtgtcgatgtacgccgagcgcgagcgg
atcggcttcgcggcggcgttgcgcgacgccgtgacgggcaaggtgccgctgctcaacccg
cgctcgcgcaacgcgatcgccggtttcgtcgagatgatggacgagctcggcgtgctggtc
gagcgcggcgacgacgtggccgacgtcctggaagcggtgctggagaagaccgcataccgg
gccgagctggaggccagcgaggacccgcaggaccacacccgggtggagaacctgaacgag
ctggtcacggtggcccgcgagttcggggacttgaacacccccgcgccggacgaggtggcg
gcctccgacctcggggacctgccctccgagggctcgctcgcggcgttcctggagcgggtg
tcgctggtcgcggacgccgactcggtgccggacgcggagtccgacggcgtggtcacgctg
atgaccctgcacaccgccaagggcctggagtacccggtggtgttctgcaccggctgggag
gacggcgtcttcccgcacctgcgcgccctcggcgacccgacggagctggccgaggaacgg
cgcctggcgtacgtcggcatcacgcgcgcccagaagcggctgtacctgtcgcgggcgctg
gtgcgctcggcgtggggccagccctcggcgaacccggcgtcgcggttcctggacgagatc
ccggccgacctgctcgactggcggcgcacggagcccaagcgctccgcgccgtccgcgccg
acctcgtggggcggcggtcgcggttccggtccgtcgcgcccggcgccgacgaacgcgggc
tggaaggacacgcccgcgctgaagctggacgtgggcgaccgggtgagccacgacaagtac
ggcctcggccgcgtggtggccgtggacggctccgggccccgcgcgaccgccacgatcgac
ttcggcggcgcgggaacggtgcggctgatgctcatcggcggcgtgcccctcgtgaagctc
tga
DBGET
integrated database retrieval system
