Saccharothrix sp. 6-C: IOD16_34345
Help
Entry
IOD16_34345 CDS
T09941
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sacx
Saccharothrix sp. 6-C
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sacx03000
]
IOD16_34345
03036 Chromosome and associated proteins [BR:
sacx03036
]
IOD16_34345
Transcription factors [BR:
sacx03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
IOD16_34345
Chromosome and associated proteins [BR:
sacx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IOD16_34345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
AsnC_trans_reg
HTH_24
MarR_2
HTH_20
HTH_IclR
NirdL-like_HTH
HTH_11
MarR
HTH_35
HTH_31
TrmB
HTH_27
DUF7343
HTH_34
Sigma70_r4
LexA_DNA_bind
B-block_TFIIIC
PerC
Motif
Other DBs
NCBI-ProteinID:
QQQ76073
LinkDB
All DBs
Position
complement(7978398..7978865)
Genome browser
AA seq
155 aa
AA seq
DB search
MDALDRQIIAALRENGRATYADLGRKVGLSASAVHERVGKLEATGVIVGYHAVVDPSAVG
LGVTALVSIHPTDTADDDELAVALAELVEVESCYRVAGDESFIVKVRVATVDDLERSLGR
LRRIQGVARTRTTVVLSTRFEGRPNTAAAGPPGDA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtggacgctcttgatcgtcagatcatcgccgccctccgggagaacggccgggccacctac
gccgacctggggcgcaaggtgggcctctcggcctccgccgtgcacgagcgggtcggcaag
ctggaagccacgggggtgatcgtcggctaccacgccgtggtcgacccgagcgccgtgggc
ctgggcgtgaccgcgctggtcagcatccaccccaccgacaccgcggacgacgacgagctg
gccgtcgcgctggccgagctggtcgaggtcgagtcgtgctaccgggtggcgggcgacgag
tcgttcatcgtgaaggtccgggtcgccacggtggacgacctggagcgctcgctgggccgg
ttgcggcgcatccagggcgtcgcgcgcacgcgcaccaccgtcgtgctgtccacccggttc
gagggccgtccgaacaccgcggcggccggtcccccgggcgacgcgtag
DBGET
integrated database retrieval system
