Saccharothrix sp. 6-C: IOD16_34885
Help
Entry
IOD16_34885 CDS
T09941
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IOD16_34885 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_34885 (xth)
Enzymes [BR:
sacx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IOD16_34885 (xth)
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IOD16_34885 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QQQ76163
LinkDB
All DBs
Position
complement(8076911..8077768)
Genome browser
AA seq
285 aa
AA seq
DB search
MRVATWNVNSVKQRLPRLLPWLDQRQPDVVCLQETKLADDAFAALLGDELSSRGYEVAAH
GESRWNGVAILSRVGLEDVVDGLADGPGFPHPEARAVAATCGGVRVHSVYVPNGRTPDSD
HYHYKLAWLAALRDVVAAGPRDVVVCGDVNIAPADADVFDPAAYVGHTHVTAPEREALAA
LQAVGLHDVVRDRWPDRRVFTYWDYRAGMFHQDLGMRIDLVLASTPVAARVEAAWVDRHA
RKGTGPSDHAPVVVDLDEAPDGDIGPVVPPPSAPRARKAVKLPQS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtggctacttggaacgtgaactcggtcaagcagcggttgccgcggttgttgccg
tggctcgaccagaggcagcccgatgtcgtctgcctgcaggagacgaaactcgcggacgac
gcgttcgcggcgctcctcggtgacgagctgtccagccgcgggtacgaggtggcggcgcac
ggggagagccggtggaacggggtcgcgatcctctcccgggtgggcctggaggacgtggtc
gacgggctcgccgacgggcccgggttcccgcaccccgaggcgcgggcggtggcggcgacg
tgtggtggggtgcgggtgcactccgtctacgtgcccaacgggcggacgcccgattccgac
cactaccactacaagctggcctggctggcggcgttgcgggacgtcgtcgcggccgggccg
cgggacgtggtggtctgcggtgacgtcaacatcgcgcccgccgacgcggacgtgttcgac
ccggcggcctacgtcggccacacgcacgtgaccgcgcccgaacgggaggcgctggcggcg
ttgcaggcggtcgggctgcacgacgtggtccgcgaccggtggccggaccggcgggttttc
acctactgggactaccgcgccggcatgttccaccaggacctcggcatgcgcatcgacctg
gtgctggcgtcgaccccggtcgccgcgcgggtcgaggcggcgtgggtcgaccggcacgcg
cgcaagggcacggggccgagcgaccacgccccggtggtcgtcgacctggacgaggcgccc
gacggggacatcggcccggtcgtgccgccgccgtccgcgccgcgcgcccgcaaggcggtg
aagctcccgcagtcctag
DBGET
integrated database retrieval system
