Saccharothrix sp. 6-C: IOD16_36265
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Entry
IOD16_36265 CDS
T09941
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IOD16_36265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacx03400
]
IOD16_36265
Enzymes [BR:
sacx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
IOD16_36265
DNA repair and recombination proteins [BR:
sacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IOD16_36265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QQQ76409
LinkDB
All DBs
Position
complement(8350169..8350939)
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AA seq
256 aa
AA seq
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MRIGAHVRDDDPLGAAVARGADVVQFFLADPQGWKAPKPHPQTEGLLAADLEVFIHAPYL
ANVASLNNRIRIPSRKMVLQHADGAAEVGAKGLIVHGGHVAKGEDPGDGIANWRKMFERQ
AESGGFAVPILIENTAGGENAMARTFDMLGRLWDAVGEFGAGFCLDTCHAFASGEDLVGI
VDRVKAITGRIDLVHLNSSRDEFGSSRDRHANIASGTIDPDQLVAVAAAAGSPVLVETPD
EGQAADIAFLREHLGR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggggcccacgtccgcgacgacgacccgctcggcgccgctgtcgcccgcggc
gccgacgtcgtgcagttcttcctggccgacccgcaggggtggaaggcgccgaagccgcac
ccgcagaccgaggggttgctggccgccgacctggaagtcttcatccacgcgccgtacctg
gccaacgtcgcgtcgctcaacaaccgcatccgcatcccgtcgcggaagatggtgctccag
cacgccgacggcgcggccgaggtcggcgccaagggcctgatcgtgcacggcgggcacgtc
gccaagggcgaggacccgggcgacgggatcgccaactggcgcaagatgttcgagcggcag
gccgagagcggcggcttcgcggtcccgatcctgatcgagaacaccgcgggcggcgagaac
gccatggcgcggacgttcgacatgctcggcaggctgtgggacgcggtcggcgagttcggc
gccgggttctgcctggacacctgccacgcgttcgcctccggcgaggacctggtcggcatc
gtggaccgggtgaaggccatcaccgggcgcatcgacctggtccacctcaacagctcccgc
gacgagttcggctcctcgcgcgaccggcacgccaacatcgcgtccggcaccatcgatccc
gaccagttggtcgccgtggccgccgccgccggctcgccggtgctggtcgagaccccggac
gaagggcaggcggcggacatcgcgttcctccgcgagcacctgggtcgttga
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