Saccharothrix sp. 6-C: IOD16_37285
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Entry
IOD16_37285 CDS
T09941
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IOD16_37285 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sacx01007
]
IOD16_37285 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacx03016
]
IOD16_37285 (serS)
Enzymes [BR:
sacx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IOD16_37285 (serS)
Amino acid related enzymes [BR:
sacx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IOD16_37285 (serS)
Transfer RNA biogenesis [BR:
sacx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IOD16_37285 (serS)
Prokaryotic type
IOD16_37285 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
GNAT_C
Motif
Other DBs
NCBI-ProteinID:
QQQ76580
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All DBs
Position
8558814..8560064
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AA seq
416 aa
AA seq
DB search
MIDLKALRENPEAVRASQRARGEDETVVDALLSADERRRAAIARADALRGEQKTFGKQVG
RARGEERDALLAKGKELAAEVKAAEAEQSATEAELTELHRAVPNVVHPEAPEGGEDDYVV
LKHVGEPREFDFDPADHLDLGVRLGAIDMERGAKVSGSRFYFLTGVGAQLELALLNMAVA
QATAAGFTLMITPTLVRPEIMAGTGFLGAHASEIYRLEADDLYLVGTSEVPLAGYHADEI
LDGPKRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYVKPEDAEAEHARLLAWEE
EMLAKIEVPYRVIDTAAGDLGTSAARKFDCEAWIPTQQAYRELTSTSNCTTFQARRLNVR
YRDENGKPQIAATLNGTLATTRWIVAILENHQQADGSVVVPQALRPFLGLDVIKPA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacctgaaggcactgcgcgagaacccggaagccgtccgcgcgtcgcaacgcgcg
cgtggcgaggacgagaccgtggtcgacgcgctgctgtccgccgacgagcgccgccgggcc
gccatcgcccgcgccgacgcgctgcgcggcgagcagaagacgttcggcaagcaggtgggc
cgggccaggggcgaggagcgcgacgcgctgctggccaagggcaaggagctggccgccgag
gtcaaggccgccgaggcggagcagtccgccaccgaggcggagctgaccgagctgcaccgc
gccgtgcccaacgtggtccaccccgaagcgcccgagggcggcgaggacgactacgtcgtg
ctcaagcacgtcggcgagccgcgcgagttcgacttcgaccccgccgaccacctcgacctc
ggcgtgcggctcggcgcgatcgacatggagcgcggcgcgaaggtgtccggctcgcgcttc
tacttcctgacgggcgtcggcgcccagctggagctggcgctgctgaacatggccgtcgcc
caggccaccgcggccgggttcacgctgatgatcacgccgacgctggtgcgcccggagatc
atggccggcaccgggttcctcggcgcgcacgcgagcgagatctaccgcctcgaagccgac
gacctgtacctcgtcggcacctcggaggtgccgctcgcgggctaccacgcggacgagatc
ctggacggcccgaagcggtacgcgggctggtcgtcgtgctaccggcgcgaagcgggctcg
tacggcaaggacacccgcggcatcatccgcgtgcaccagttcaacaaggtcgagatgttc
tcctacgtcaagccggaggacgccgaggccgagcacgcccggctgctggcgtgggaagag
gagatgctggccaagatcgaggtcccgtaccgggtcatcgacacggccgccggcgacctc
ggcacgtcggccgcgcgcaagttcgactgcgaggcgtggatcccgacccagcaggcctac
cgcgagctgacgtcgacctcgaactgcaccacgttccaggcccgccggctcaacgtgcgc
taccgggacgagaacggcaagccgcagatcgccgccacgctcaacggcacgctggccacc
acgcggtggatcgtcgcgatcctggagaaccaccagcaggccgacggctcggtcgtcgtg
ccgcaggccctgcgcccgttcctcggcctcgacgtgatcaagcccgcctag
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