Saccharothrix sp. 6-C: IOD16_38460
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Entry
IOD16_38460 CDS
T09941
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sacx
Saccharothrix sp. 6-C
Pathway
sacx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sacx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IOD16_38460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sacx01007
]
IOD16_38460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sacx03016
]
IOD16_38460 (lysS)
Enzymes [BR:
sacx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
IOD16_38460 (lysS)
Amino acid related enzymes [BR:
sacx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IOD16_38460 (lysS)
Transfer RNA biogenesis [BR:
sacx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IOD16_38460 (lysS)
Prokaryotic type
Other AARSs
IOD16_38460 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QQQ76781
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Position
8794941..8796452
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AA seq
503 aa
AA seq
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MSEQPATGSATSDDDLPEQLRVRREKRARLLERGVDPYPVEVPRTHTLREVREAHQDLEP
DTATGDVVGVTGRVMFIRNTGKLCFATLREGDGTELQAMLSLNGVGEQSLGEWKSDVDLG
DHVFVHGEVITSRRGELSVMADRWSMTAKALRPLPVAHKELAEETRIRQRYVDLILREQA
RNTVRNRAAVVRSLRESFHRRGFIEVETPMLQTLQGGATARPFVTRSNALDIDLFLRIAP
ELYLKRCVVGGIEKVFEINRNFRNEGMDSSHSPEFSMLEYYEAYATYDSNAVLTRELIQE
AALAIAGSHVVTLVDGTEYDLGGEWTTMGMYDSLSETAGEEVTPETSPERLRELADKHGL
ETDPKTGHGKLVEELWEHLVGDALHAPTFVRDFPVETSPLTRQHRTRPGVAEKWDLYVRG
FELATGYSELVDPVVERERLEAQARLAATGDAEAMPVDEDFLRSLEYGMPPSGGVGMGID
RLLMALTGLGIRETILFPLVRPE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcagccagcgaccggttccgcgaccagcgacgacgatctccccgagcagctg
agggtgcgccgggagaagcgggcgcgactgctggaacgcggtgtcgacccgtatccggtc
gaagttccgcgcacgcacacgttgcgcgaggtccgcgaagcgcatcaggacctggaaccg
gacacggcgaccggtgatgtggtgggtgtgacgggccgggtgatgttcatccgcaacacc
ggcaagttgtgcttcgccacgctgcgcgagggcgacggcaccgaactgcaggcgatgctg
agcctgaacggcgtcggcgagcagtcgctcggcgaatggaagtccgacgtcgacttgggc
gaccacgtattcgtgcacggcgaggtcatcacgtcccgccgcggcgaactgtcggtgatg
gccgaccggtggtccatgacggcgaaggcgttgcgcccgttgccggtcgcgcacaaggaa
ctcgccgaggaaacccgcattcgccagcggtacgtggatctgatcctgcgcgagcaggcg
cggaacacggtgcgcaaccgggccgccgtggtgcgctcgttgcgggagtcgttccaccgg
cgcggtttcatcgaagtcgagaccccgatgttgcagacgttgcagggcggcgcgaccgcc
cggccgttcgtgacccggtcgaacgcgctcgacatcgacctgttcctgcggatcgcgccc
gagctgtacctgaagcggtgcgtggtgggcggtatcgagaaggtcttcgagatcaaccgc
aacttccgcaacgagggcatggactcgtctcattcgcccgagttctcgatgctggagtac
tacgaggcgtacgccacgtacgactcgaacgcggtgctgacccgggagctgatccaggaa
gccgcgttggcgatcgccggttcgcacgtggtgacgttggtcgacggcacggagtacgac
ctcggtggcgagtggacgacgatgggcatgtacgactcgttgtccgaaacggcgggcgaa
gaagtcacgcccgaaacttctccggagcggttgcgcgagctggccgacaagcacggcctg
gagacggacccgaagaccgggcacggcaagctggtcgaggagctgtgggagcacctggtc
ggtgacgcgctgcacgcgcccacgtttgtgcgcgatttcccggtggagacctcgccgctc
acccgtcagcaccgcacccggccgggtgtggccgaaaagtgggacctgtacgtgcgcggt
ttcgagttggccacgggatactcggaactggtggacccggtggtcgagcgggagcggttg
gaagcccaggcccggctggcggcgaccggtgacgccgaggcgatgccggtcgacgaagac
tttctgcgatcactggagtacggaatgccaccgagcggtggtgtgggaatgggcatcgac
cgcctgctgatggcgctcaccggtctcggtatccgggagacgatcctgttccccctcgtg
cgcccggaatga
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