Streptococcus alactolyticus: O6R09_03370
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Entry
O6R09_03370 CDS
T08982
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sacy
Streptococcus alactolyticus
Pathway
sacy03410
Base excision repair
sacy03430
Mismatch repair
sacy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O6R09_03370 (recJ)
03430 Mismatch repair
O6R09_03370 (recJ)
03440 Homologous recombination
O6R09_03370 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacy03400
]
O6R09_03370 (recJ)
DNA repair and recombination proteins [BR:
sacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
O6R09_03370 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O6R09_03370 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O6R09_03370 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WBB06973
UniProt:
A0ABY7M356
LinkDB
All DBs
Position
638187..640385
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AA seq
732 aa
AA seq
DB search
MITSKYNWKNIEKEPDDGFFEVTKKENITALASKILYSRGVDNDEKLAQFLSNDLSQLHD
PYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIMKEALEMLGAEVQVYLPNRF
VDGYGPNESVYKYFIEQQQVSLIITVDNGVAGHEAISYAQSQGVDVIVTDHHGLPAELPD
AFAIVHPEYPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR
IMVKVGLEMLKQTERIGLIELMKVSDIDMSDVNEETVGFKIAPQLNSLGRLDDPNRAIEL
LTGFDDEEALSIAQMINAKNEERKEIVQKIYDEAMGMVDLDKPVQVLAKEGWHPGVLGIV
AGRILEHIAQPVIVLNIEDDMAKGSARSIEAINIFHALDDHRDLFEAFGGHAGAAGMTLP
VDNLEQLSQVLCDYIAENDINLAQKKTLIIDEVLDLSEIDLDTVKSLEKIAPFGMDNAKP
VFEIKDLTVKQARTMGQNGAHLKLKIAQGSTAVDLVAFNQGHLVQEFQQAQNLCLAVTLS
INKWNGQTTVQLMLEDARVDGVQLIDIRSKNAILPERVPVLSEDTSASEVVVLDIPDKAE
ELKSLFVGRQFDAVYFKNHIKRAYYLTGYGTREQFAKLYKTIYQFPEFDVRYKLKELSHY
LNIPDILLVKMIQIFDELDFVTITDGVMVVNKGAEKRSISDSKIYQDLKQEVKFQELMAL
GTPQEIYDWLMN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgataacaagtaaatacaattggaaaaatattgaaaaagagccagatgatggctttttt
gaagtgacaaaaaaagaaaatataacggcattagccagcaaaatcctatacagtcgtggc
gttgacaacgacgaaaaactagctcaatttttatcgaatgatttgtcacaacttcacgat
ccatatcttttgcacgatatggacaaggcagttgcccgcattcgtcaagctattgaaaat
tatgaacaaatcttggtttatggtgactatgatgccgacgggatgaccagcgctagtatc
atgaaagaagcgttggaaatgcttggagctgaggttcaagtctatcttcctaaccgattt
gttgatggttatggaccaaatgaatcggtttataagtatttcatcgagcaacaacaggtt
tctttgattattacggtggataatggcgtagctggacatgaagctattagctatgcacaa
agtcaaggagtagatgtcattgttactgaccaccatggcttaccagcagagcttccagac
gcatttgccattgtacatccagagtatccagaagctgactatccttttaaatatttagca
ggatgtggtgtagccttcaaagtggcttgtgccctattagaatccatcccaaccgaaatg
ttagacttggttgctatcggaacgattgccgatatggttagtctaacagatgaaaatcgt
atcatggtcaaggttgggcttgaaatgctcaagcagaccgaacgcattggtctcatagag
cttatgaaagtatctgatattgacatgtcagatgttaatgaggaaactgttgggtttaaa
attgcgccgcagctaaattctcttggtcgtctagatgatccaaatcgagctattgaatta
ttgactggttttgatgatgaagaagcgctaagtattgcgcaaatgattaatgccaagaat
gaagaacgtaaagaaattgttcaaaaaatttacgatgaagccatgggcatggttgatctt
gacaagcctgtgcaggtgttggcaaaagaaggctggcacccgggtgttctaggaattgtc
gctggtcgtattttggagcacattgctcagccagttattgtcttaaacattgaagacgat
atggcaaaaggctctgcaagaagtattgaggcaatcaatatcttccatgcacttgatgac
caccgtgatttatttgaagcttttggtggacatgctggtgctgcaggaatgaccttgcca
gttgataacttagagcaattatcacaagttttatgtgattacattgctgaaaatgatatt
aatttagctcagaaaaagactttgatcattgatgaagtgctggacttgtcagaaattgat
ttagacactgttaaaagtcttgagaagatcgcaccttttgggatggataatgctaagcca
gtctttgaaatcaaagaccttaccgttaaacaagcacgtaccatggggcaaaatggtgct
cacttgaaattaaaaattgctcaaggaagtacggcggttgaccttgttgcctttaaccaa
ggtcatttggtacaagaattccagcaagcgcagaacctgtgccttgccgttactttgtca
atcaacaaatggaacgggcaaaccacagttcagttgatgcttgaagacgcgcgtgttgac
ggcgttcagttgattgatattcgttccaaaaatgccattcttcctgaacgtgttcctgtt
ttgagtgaagacaccagtgccagtgaagtggttgtactagatattcctgataaggctgaa
gaactcaaatccctttttgttggtcgacaatttgatgccgtttactttaaaaatcacatt
aaacgagcttattatttgactggctatggaactcgtgaacaatttgctaagttgtataaa
acgatttatcaattccctgaatttgatgttcgttacaagctgaaagaattgagtcattat
cttaatattcctgatattcttttggtcaaaatgattcaaatttttgatgaattggatttt
gtaaccatcacagatggagtaatggtcgtcaataaaggtgctgagaaacgcagcatttct
gatagtaaaatttatcaagatcttaagcaagaagtgaaatttcaagagctcatggcactt
ggaacgccacaagaaatttatgactggttgatgaactag
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