KEGG   Streptococcus alactolyticus: O6R09_03540
Entry
O6R09_03540       CDS       T08982                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sacy  Streptococcus alactolyticus
Pathway
sacy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sacy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O6R09_03540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sacy03019]
    O6R09_03540
Messenger RNA biogenesis [BR:sacy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     O6R09_03540
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Regulator_TrmB Lipase_bact_N
Other DBs
NCBI-ProteinID: WBB07007
UniProt: A0A6N7WP74
LinkDB
Position
671683..673344
AA seq 553 aa
MSDIKLIALGGVRENGKNLYVVEVNDSIFILDAGLKYPENEQLGVDEVIPNLDYLIENKK
RVQGIFLTHGHADAIGALPYILSEMKVPVFGSPLTIELAKLFVKKNNNVKKFNQFHVIDA
ETEIEFADATISFFKTTHSIPESLGIVVGTDEGQIVYTGDFKFDQAARKYYRTDLARLTE
IGRDGVLALLSDSANATSHVLTASESEVGAEIDDVIANAEGRVIIAAVASNLSRIQQVFD
SAAEHRRRVVLTGFDAENIIRTAIRMKRLGVADEKLIVKPKDMHKFEDHELIILEAGRMG
EPINGLQKMALGRHRYVQIKDGDLVYIVTTPSTSKEAVVARVENLIYKAGGTVKLITQDL
CVSGHANARDLQLMINLLQPKYLFPIQGEYRNLSAHADLAQEVGMYPEDIYIVKRGDVMV
LEKDGFHHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK
AKIHTRGFVYVKKSRDILQEAAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFLFDQTK
RRPAILPVIMEVR
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgagcgatattaaactaattgccctaggtggagtccgtgaaaacggtaaaaacctgtat
gtggttgaagtgaacgattctatttttattttagatgctggtttgaaatatcctgaaaat
gaacaattgggtgttgatgaggtcattccaaatctagattatttgattgaaaataaaaaa
cgtgttcaagggattttcttgacacatggtcacgcagatgcaattggggctttgccttac
attttgtcagaaatgaaggtacctgtctttgggtcaccacttacgattgagcttgctaag
ctttttgtgaagaaaaacaacaatgtgaagaaattcaatcagtttcatgtcattgacgca
gaaacagagattgagtttgcggatgcgaccatttccttcttcaaaacgacccattctatt
ccagaaagtttagggattgtggttggtacagatgaaggtcaaattgtctatactggtgat
tttaaatttgaccaagctgcccgtaaatactaccgtacagacttagcacgcttgactgaa
attggtcgtgacggcgttttggctttgttgtcagattctgccaatgcgacaagtcatgtt
ttaacggctagtgaatcagaagttggggcagaaattgatgacgtgattgccaatgccgaa
gggcgtgttatcattgcggctgtggcgtcaaacctttctcgtatccaacaagtttttgat
tctgccgctgaacaccgtcgccgtgtggtcttgactggttttgatgcggaaaatatcatc
cgtaccgctattcgcatgaaacgcttgggcgtggcagatgaaaaactcattgttaagcca
aaagatatgcataaattcgaagaccatgaattgattatcttggaagctggacgtatgggt
gagccaatcaatggtttgcaaaaaatggctttgggacgtcaccgctatgttcaaatcaaa
gacggtgatttggtgtatatcgtaaccactccaagcacttcaaaagaagctgttgtggct
cgcgttgagaaccttatctacaaagcaggtggaacggttaaactcatcacacaagatttg
tgcgtatctggtcatgccaatgcccgtgacttgcaattgatgattaacttgttgcaacct
aaatacctcttccctatccaaggggaataccgcaacctttctgcccacgcagacttggca
caagaagttgggatgtatcctgaggacatttatattgtcaaacgtggggacgttatggta
cttgaaaaagatggtttccaccacgaaggcagtgttcctgctggtgatgtgatgattgat
ggaaatgcgattggtgatgtcggcaatatcgtccttcgtgaccgtaaagtcttgtcagaa
gacggtattttcatcgtggctttgacagtcaacaaacgcgaaaagaaaatcgtatcaaaa
gctaaaattcatacgcgtggctttgtttatgtgaagaaaagccgtgatatcttgcaagag
gcagcagaattggtcaaccaaacggttgaaaattacttggcacaagacagttttgactgg
ggcgaattaaaaggagctgtccgtgatgacgtggctaagttcttgtttgaccaaaccaaa
cgccgtccagctattttaccagttatcatggaagtgcgttaa

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