Streptococcus alactolyticus: O6R09_03540
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Entry
O6R09_03540 CDS
T08982
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sacy
Streptococcus alactolyticus
Pathway
sacy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sacy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6R09_03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacy03019
]
O6R09_03540
Messenger RNA biogenesis [BR:
sacy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O6R09_03540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Regulator_TrmB
Lipase_bact_N
Motif
Other DBs
NCBI-ProteinID:
WBB07007
UniProt:
A0A6N7WP74
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Position
671683..673344
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AA seq
553 aa
AA seq
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MSDIKLIALGGVRENGKNLYVVEVNDSIFILDAGLKYPENEQLGVDEVIPNLDYLIENKK
RVQGIFLTHGHADAIGALPYILSEMKVPVFGSPLTIELAKLFVKKNNNVKKFNQFHVIDA
ETEIEFADATISFFKTTHSIPESLGIVVGTDEGQIVYTGDFKFDQAARKYYRTDLARLTE
IGRDGVLALLSDSANATSHVLTASESEVGAEIDDVIANAEGRVIIAAVASNLSRIQQVFD
SAAEHRRRVVLTGFDAENIIRTAIRMKRLGVADEKLIVKPKDMHKFEDHELIILEAGRMG
EPINGLQKMALGRHRYVQIKDGDLVYIVTTPSTSKEAVVARVENLIYKAGGTVKLITQDL
CVSGHANARDLQLMINLLQPKYLFPIQGEYRNLSAHADLAQEVGMYPEDIYIVKRGDVMV
LEKDGFHHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK
AKIHTRGFVYVKKSRDILQEAAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFLFDQTK
RRPAILPVIMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattaaactaattgccctaggtggagtccgtgaaaacggtaaaaacctgtat
gtggttgaagtgaacgattctatttttattttagatgctggtttgaaatatcctgaaaat
gaacaattgggtgttgatgaggtcattccaaatctagattatttgattgaaaataaaaaa
cgtgttcaagggattttcttgacacatggtcacgcagatgcaattggggctttgccttac
attttgtcagaaatgaaggtacctgtctttgggtcaccacttacgattgagcttgctaag
ctttttgtgaagaaaaacaacaatgtgaagaaattcaatcagtttcatgtcattgacgca
gaaacagagattgagtttgcggatgcgaccatttccttcttcaaaacgacccattctatt
ccagaaagtttagggattgtggttggtacagatgaaggtcaaattgtctatactggtgat
tttaaatttgaccaagctgcccgtaaatactaccgtacagacttagcacgcttgactgaa
attggtcgtgacggcgttttggctttgttgtcagattctgccaatgcgacaagtcatgtt
ttaacggctagtgaatcagaagttggggcagaaattgatgacgtgattgccaatgccgaa
gggcgtgttatcattgcggctgtggcgtcaaacctttctcgtatccaacaagtttttgat
tctgccgctgaacaccgtcgccgtgtggtcttgactggttttgatgcggaaaatatcatc
cgtaccgctattcgcatgaaacgcttgggcgtggcagatgaaaaactcattgttaagcca
aaagatatgcataaattcgaagaccatgaattgattatcttggaagctggacgtatgggt
gagccaatcaatggtttgcaaaaaatggctttgggacgtcaccgctatgttcaaatcaaa
gacggtgatttggtgtatatcgtaaccactccaagcacttcaaaagaagctgttgtggct
cgcgttgagaaccttatctacaaagcaggtggaacggttaaactcatcacacaagatttg
tgcgtatctggtcatgccaatgcccgtgacttgcaattgatgattaacttgttgcaacct
aaatacctcttccctatccaaggggaataccgcaacctttctgcccacgcagacttggca
caagaagttgggatgtatcctgaggacatttatattgtcaaacgtggggacgttatggta
cttgaaaaagatggtttccaccacgaaggcagtgttcctgctggtgatgtgatgattgat
ggaaatgcgattggtgatgtcggcaatatcgtccttcgtgaccgtaaagtcttgtcagaa
gacggtattttcatcgtggctttgacagtcaacaaacgcgaaaagaaaatcgtatcaaaa
gctaaaattcatacgcgtggctttgtttatgtgaagaaaagccgtgatatcttgcaagag
gcagcagaattggtcaaccaaacggttgaaaattacttggcacaagacagttttgactgg
ggcgaattaaaaggagctgtccgtgatgacgtggctaagttcttgtttgaccaaaccaaa
cgccgtccagctattttaccagttatcatggaagtgcgttaa
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