Stenotrophomonas acidaminiphila: AOT14_01200
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Entry
AOT14_01200 CDS
T04107
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacz03021
]
AOT14_01200 (rpoH)
Transcription machinery [BR:
sacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOT14_01200 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
IF2_N
HTH_11
HTH_3
HTH_10
GntR
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ALJ26582
UniProt:
A0A0R0E5F4
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All DBs
Position
145546..146421
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AA seq
291 aa
AA seq
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MSQNTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQELARRFRDEQDLDAAREL
VHSHLRFVVHVARGYNGYGLQLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVSAVARDLNVSEREVMEMES
RLSGRDVGFDAPSDEDDDHAPPSPAAYLVARDEDPSQAYEREDSEENQLQLLREGLANLD
QRSRDIIARRWLDADSKVTLQELADEYGVSAERIRQIEANALKKMKALFTA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaacacctccactgcccttgtggcgaacaatcttccgattcccagtgcgctg
ggttcgctggatgcctacatcggtgccgtgcaccagatcccggtgctctcggtcgatgag
gaacaggaactggcgcgccgcttccgcgacgagcaggacctggatgccgcgcgcgagctg
gtgcattcgcacctgcgtttcgtggtgcacgtggcccgcggctacaacggctacggcctg
cagctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttc
gacccggacatgggcgtgcgcctggtctccttcgcggtgcactggatccgtgccgagatg
cacgagttcatcctcaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aaactgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgccgccgag
gtcagcgcggtggcccgggacctgaacgtctccgagcgcgaagtgatggagatggagtcg
cgcctgtccggtcgcgacgtcggtttcgatgcgccgtccgacgaggacgacgaccatgca
ccgccgtcgccggcggcgtacctggtcgcgcgcgacgaagacccgtcgcaggcctacgag
cgcgaggacagcgaggaaaaccagctgcagctgctgcgcgagggcctggccaacctggac
cagcgttcgcgcgacatcatcgcccgccgctggctcgatgccgacagcaaggtgacgctg
caggagctggccgacgagtacggcgtgtcggccgagcgcatccgccagatcgaggccaac
gcgctgaagaagatgaaggcgctgttcaccgcctga
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