Stenotrophomonas acidaminiphila: AOT14_01500
Help
Entry
AOT14_01500 CDS
T04107
Symbol
topA_1
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacz03032
]
AOT14_01500 (topA_1)
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_01500 (topA_1)
Enzymes [BR:
sacz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AOT14_01500 (topA_1)
DNA replication proteins [BR:
sacz03032
]
Prokaryotic type
DNA Topoisomerases
AOT14_01500 (topA_1)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOT14_01500 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALJ26612
UniProt:
A0A0S1AUZ6
LinkDB
All DBs
Position
complement(183748..186267)
Genome browser
AA seq
839 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDHGFAMRYDLIEKN
EKHVEAIAKAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKSMQRVVFTEITPR
AIKEAMAQPRAIADNLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFKAREYWSIQADCAHPTQHFSAKLIRLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGRLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGEE
GTVGLISYMRTDSVNLSQDALVEIRDVIARDYGTASLPDKPNTYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLTDDERRLYELIWKRAVACQMIPATLNTISVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDSKNAEDEDEGRKLPAMKPGDNVPLERIGAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYTEMEGRSFKPTDVGRAVSKFLSSHFTRYVDYDF
TAKLEDELDAVSRGEEEWVPLMERFWGPFKELVSDKSESLDRTDAGSARVLGIDPGSGKE
VSARIGRFGPMVQIGTVEDEEKPKFASLQPGQSIYSISLEDALKLFDMPRRLGADANGEE
VSVGIGRFGPFAKRGSTYASLKKEDDPYKIDLARALFLIEEKEEIARNRIIKEFEGSDIQ
VLNGRFGPYISDGTLNGKIPKDREPASLTLAEVQQLMAETGKPARKGFGAKKAATKKAAA
KKSAVKKDAAPKKKAAKKAPARKAAAKKATTTKTPVKKAVKKAVVKAVKAPVDDDTPPF
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtcccgaag
gaaggcgcggtcgatccggaccacggtttcgccatgcgctacgacctgatcgagaagaac
gaaaagcacgtcgaggccatcgccaaggccgccaagggcgccgacgacatcttcctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggaa
cgcgggctgctgaaggacaagtcgatgcagcgcgtggtcttcaccgagatcaccccgcgc
gcgatcaaggaagccatggcgcagccgcgcgccatcgccgacaacctggtcgacgcccag
caggcacggcgcgcgctggattacctggtcggcttcaacctctccccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaggcgttcaaggcgcgcgagtactggtcgatccaggccgac
tgcgcgcatccgacccagcatttctcggccaagctgatcaggctggacgggcagaagttc
gagcagttcaccatcaccgacggcgacaccgccgaggccgcacgcctgcgcatccagcag
gccgcgcagggccgcctgcacgtcaccgacgtcgccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acgcgcaagaccatgcaggtcgcgcagaagctgtacgaaggcgtggcgatcggcgaggaa
ggcaccgtcggcctgatctcctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggtcgagatccgcgacgtgatcgcccgcgactacggcaccgcctcgcttccggacaag
cccaacacctacaccaccaagagcaagaacgcccaggaggcacacgaagcggtgcgcccg
acctcggcgctgcgcacgccggcgcaggtggccaggttcctgaccgacgacgagcgccgg
ctgtacgagctgatctggaagcgcgccgtggcctgccagatgatcccggccacgctcaat
accatcagtgtcgacctgtccgccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtgcccggcttcctggccgtctacgaggaaggcaaggacagcaagaacgccgag
gacgaggacgagggccgcaagctgccggcgatgaagcccggcgacaacgtgccgctggag
cgcatcggcgccgaacagcatttcacccagccgccgccgcgctacaccgaagcggcgctg
gtgaaggcgctcgaggaatacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaagtacaccgagatggaaggccgcagcttcaagcccaccgacgtc
ggccgcgcggtcagcaagttcctgtccagccacttcacccgctacgtcgactacgacttc
accgccaagctcgaggacgagctggacgcggtgtcgcgcggcgaggaggaatgggtgccg
ctgatggagcgcttctggggcccgttcaaggaactggtcagcgacaagagcgaatcgctg
gaccgcaccgacgccggcagcgcgcgcgtgctcggcatcgacccgggcagcggcaaggaa
gtgagcgcgcgcatcggccgcttcgggccgatggtgcagatcggcaccgtcgaggacgag
gaaaagccgaagttcgcctcgctgcagcccggccagagcatctattccatctcgctggaa
gacgcgctgaagctgttcgacatgccgcgcaggctcggcgccgacgccaatggcgaggaa
gtgagcgtgggcatcggccgcttcggcccgttcgccaagcgtggcagcacctacgcctcg
ctgaagaaggaggacgatccgtacaagatcgacctggcccgcgcactgttcctgatcgag
gaaaaggaagagatcgcccgcaaccgcatcatcaaggagttcgagggttcggacatccag
gtgctcaacggccggttcggtccctacatcagcgacggcaccctcaatggcaagattccc
aaggaccgcgagccggcctcgctgaccctggccgaagtccagcagctgatggccgagacc
ggcaagccggcgcgcaagggcttcggcgcgaaaaaggccgccaccaagaaggccgcggcg
aagaagagcgcggtgaagaaggacgccgcgccgaagaagaaggccgccaaaaaggccccg
gccaggaaagcggcggccaagaaggccacgaccaccaagaccccggtgaagaaggccgtc
aagaaagccgtcgtgaaggccgtgaaggcaccggtggacgacgacacgccgccgttctga
DBGET
integrated database retrieval system
