Stenotrophomonas acidaminiphila: AOT14_02230
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Entry
AOT14_02230 CDS
T04107
Name
(GenBank) type IV secretion protein Rhs
Organism
sacz
Stenotrophomonas acidaminiphila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
ALJ26684
UniProt:
A0A0S1AV72
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All DBs
Position
complement(266724..271565)
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AA seq
1613 aa
AA seq
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MDRWRVLPTTVYNVLAILAMAMTVPTAQAQNSSLITDDTGGVTPPAIYCPSTGGGCFTSR
EAAVSAMRAATPHVGHLLVPAPRDPGSPTIFFHVPDQAPASYGASLYGIDHDGVIGGDGY
CPQSLATQDRPTDWGGNYCYDEAEMFDGFIARPKSCGWHSCSYRDYAIFGEYAMPYSSIS
TAQYIRWVTPTTYIRVNTAQEGWIQHSIHDKYIQYLEDDHTDGSTRVRTARMMKIQRFAC
PEGMLPIATTDITLNPRLCRSSIKPHIRVTTLRQAKSCAVNAHPCHPSSGDKSRAETDFT
FAGRPFVRHYHSLRETSPRGFRMGEGWTHSFASQMLSPNSQSMLVTSDGYWAPYIPLNSQ
HRMVPSLDNASLDAMPDGSWNLTESNGDISTFVGFRLTRVRTPGAPERDVALEYSATGQL
LRLIDGSGRAVNFTYDLSSLLTQVTLPDGTYFTYQYDANENLVRVVSSSGTDKQYHYGEP
GLATNGDRGLLTGITYEDGIRYASFGYDIHGRVLASTLHGDMGELTETTRILYNAADSAQ
VTLSSGQVRTYTYTGDFYRKPITVSDTGGTTSYTYNGYSQIASRTDKRGAITRYGYTNWR
MTSLTSAFGTSSQRTVETDWNTSVNLPSERRVRNASNALVKKTNWTYNAHGQVLSNTQTD
PAGTAVRTTAMTYCEQTDVAAGACPRVGLLLSTDGPRTDVADITSYLYYASDDAACATAP
TTCSHRKGDLWKIVDAEGHVSEILAYDGAGRPILVKDANDVITEFRHDELGRLVLRRVHG
DGNSQDRTTHVAYWPTGPVKMVTQPDGSYTRYHYDNAQRLVGIEDGAGNSINYTLDNAGN
RIKEDTHDIGGALKRTLARVYDQLGRLLSQTDAYGNATDHTYDANGNTVVLTDALGRSTS
SAYDPLDRLVMTLQDVGGIEAQTRFAYDAQDNLTKVTDPKGLHTHYTYDGFGDLLLLDSP
DTGTTQYQHDSAGNLIHRIDARNSLQSYTYDALNRLTQITGPERQYFYDSNNSTLCPANE
RSNKSRLSGFDDPSGSTRYCHNRFGDLTRKIQTIDGKVFTTKYGYDAYGRSTTLTYPDGA
VLDAVFNTNGQIAELGITPAGGIRQVVLTGVTYAPFGPATGWQYGNGRSLLRPFNLNYQP
DAVHDANMGGLSLAYVFDAAGNLTLLQDGAKTQNIAQYGYDALNRLSQVMDGPTGALIET
YSYDETGNRLSVINAGSTIAYNYPSSSHRLEDVGGAARTHDAAGNTTEISDISRQYIYDI
SGRMTQVISGGVALRNYKYDAKGQQTVSYIDTERTYFVYDEIGNLLGGYARDGNARQQII
WFGGMPVGLLQGSGADQRLHYIEPDHLGTPRVIVDGLRDVAIWTWSAAGEAFGMTQPNQD
ADNDGVLFDFDLRYPGQRHDAATGLSYNYFRDYDPATGRYVQSDPIGLMAGVSTYSYVSG
SPLIWADMYGLLQWSLLPVQWSSGTTTGTLTRTYPGAPQSVFREDTLARTTIDWTVGATC
SCTSGGFSLNEFQVSLTPIVLLRQRYDTPAIRSSTRRDELDHVRDLNNWANGAKSAVEMF
EDAFKNQTFPTEQACLVAARAAMQSHLSSSIYPAIDASRQRWDVSGKHRLIIP
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatggagagtgttacctacgaccgtctacaacgtactggccatactggccatg
gccatgacggtgccaacggcacaggcgcaaaacagctctctgatcaccgatgacactggc
ggggtcactccgcctgcgatttattgtcccagcaccggaggtggctgttttacttcccgc
gaagctgccgtatccgcgatgcgtgcagccacccctcacgtcgggcatctgcttgtaccc
gcgcctagggatcccggttcaccaaccatcttctttcatgtcccggatcaagcacccgcc
tcatatggagcctcgctctatgggatcgatcatgacggcgtaattggtggcgacggctac
tgcccgcaatcgctggcaacacaggatagacccacggattggggaggaaattattgttat
gacgaagccgagatgttcgacggcttcattgcgcgccccaagagttgcggctggcattct
tgctcgtatcgcgattatgccatattcggcgaatatgccatgccgtacagcagcatctcg
accgcacagtacatccggtgggtgacacctactacgtatatcagagtaaatacggcacag
gagggctggatccagcactccatacatgacaagtacatacagtatcttgaggatgaccat
acagacgggtcaacgcgcgtcagaacagcaagaatgatgaagatccagcgatttgcatgc
cccgaggggatgctgccaatcgccacgactgacatcactctgaatcccaggctgtgtcgg
agcagtataaagccccacatacgagtcacgactttgcgccaggcaaagtcctgtgccgtc
aacgcacacccatgtcatccttcatccggggacaagtcgcgtgccgagaccgatttcacc
tttgcaggccgacccttcgttcgccattaccactcgctgcgcgaaacgtcgcccagagga
ttccgcatgggcgaaggctggacacattcctttgcaagtcagatgctaagtccgaattcg
cagagcatgttggttacgtccgatggttactgggctccctatataccattgaactcccag
caccggatggttccttctctcgacaatgccagcctggacgctatgcccgatggcagctgg
aacctcaccgaatccaatggcgacataagtacgttcgtgggatttcgattgacgcgggtt
cgtacccctggcgcgcccgagcgcgatgttgccttggagtattcggccacaggacaactg
ctgcgcctcattgacggttcaggcagggcagtcaactttacatatgatctttccagctta
ctaacccaggtcacgctaccggatggcacctacttcacctatcagtacgatgccaacgaa
aatctcgtcagggtcgtcagcagcagcggaacagataagcagtatcactatggcgagccc
ggattggctacaaatggcgaccgcggcctgctgacgggaatcacttacgaagatggaata
aggtatgcaagctttggctatgacattcatggacgagtgttggccagcacccttcatggc
gatatgggtgagctcactgagactacccgcattctctacaacgcggctgattccgcacaa
gtgaccttgagttccggtcaggtacggacttatacgtataccggtgatttctatcgcaaa
ccaatcaccgtgagtgacaccggcgggaccacgagctacacctacaatggctacagccaa
atcgcgtcgcgaaccgacaagcgcggagcgatcacccgctatggatacaccaattggcgc
atgacgtcattgacttctgcctttggaacgagctcgcagcgtaccgtcgaaacagactgg
aacacatctgtaaatttgccctcggagcgccgtgtacggaatgcatccaacgccttggtg
aaaaagaccaactggacatataatgcgcatggacaggtgctgagcaacacacaaaccgat
cctgcgggtacggcagttcgtaccacggccatgacgtattgcgagcagactgatgtggca
gccggcgcctgtccaagagtaggtttgctgttatccacggatgggccgcgcacggatgtg
gccgacatcacgtcctacctgtactacgcaagcgacgatgcagcttgcgcaacagcccca
accacttgctcacaccgcaagggtgacttgtggaagatcgtagacgccgagggacacgtc
agcgaaatccttgcctacgatggcgcgggccgccccatcctggtgaaggatgccaatgac
gtcatcaccgaatttcgccatgatgaactcggccgattggtcttgcgaagagtacatggt
gacgggaattcgcaggatcgcaccacccacgtagcctactggcctacaggtccggtaaag
atggtgacccagccggatggctcttatacgcggtatcactatgacaatgcacagcgcctg
gtgggaatcgaggacggcgctggaaacagtatcaactacaccctggataatgcaggcaac
cgaatcaaggaggatacccatgatatcggaggcgcactcaaacgaacgttggcacgtgtc
tacgaccaactaggtcggctactctcgcagacggacgcttacggaaacgccacggatcat
acgtacgatgcgaatggcaataccgtagttcttacggacgctttgggccgcagcaccagt
agtgcttatgatcccttggatcgactggttatgaccctgcaggatgttggcggtatcgag
gcgcagacgcggtttgcttacgatgcgcaagacaacctgaccaaggttaccgaccccaag
ggactgcacacgcactacacttacgatggtttcggtgatttgttgctgctggacagccct
gacaccggtacaactcagtaccagcatgacagcgctggcaatctcattcaccggattgat
gcgcgaaattcgttgcagagctatacctacgatgcactgaaccgactgacacaaatcaca
ggacccgaaagacagtatttttacgacagcaacaacagcaccttgtgccctgcgaacgag
cgctcaaacaagagtcgactgtccggtttcgatgacccaagcggatccacacgctactgc
cacaaccgcttcggcgacttgacccgtaaaatccaaactattgatggcaaggtgtttact
acaaaatatgggtacgacgcctacggacgttcaaccaccctcacctacccagatggcgcc
gtgctggatgccgtattcaacaccaacgggcaaatagctgagttgggcatcactccggca
ggtggtatccgccaggtcgtgttgaccggagttacctacgccccgttcggtccggcgaca
ggctggcaatatggcaacggtcgtagtttgctgcgtcccttcaatctaaattaccaacca
gacgccgttcacgatgcgaacatgggtgggctttccctggcctacgtctttgatgcagct
ggcaacctgactctcctgcaagacggcgcgaagacgcagaacatcgcgcagtacggctat
gacgcgctgaacaggcttagtcaggtgatggatggcccgaccggagcactgatcgagact
tattcctacgacgaaacaggaaatcgccttagtgtgattaatgccggctccactattgcc
tacaactatccatcgagtagccacaggctggaagacgtaggcggcgctgcgcgcacgcat
gatgctgcaggcaacacgacagaaataagcgacatttctagacagtatatttatgacatt
agcggacgaatgacccaagtcatatctggcggtgtcgcactaagaaactataaatatgat
gccaagggccaacaaaccgtctcgtacatcgacacggaaagaacttacttcgtgtatgac
gagatcggcaatttactgggcgggtatgcgagagatggtaacgcgaggcagcagatcata
tggtttggcggcatgccagtggggctgctgcaaggatccggggcagaccagaggttgcat
tacatcgagccggaccatctagggactccacgcgttattgtcgatggtttgcgcgacgta
gcaatatggacttggagtgctgccggcgaggcatttggaatgacgcagcccaaccaggac
gccgacaacgacggagtcctgttcgacttcgatctgcgctatccgggccaacgccatgac
gctgcgaccggtctcagctacaactatttccgggattacgacccggccactggacgctat
gtgcagagcgatccgattgggctcatggcaggtgtgagcacgtatagctacgttagcggc
tccccattgatttgggcggatatgtacgggctacttcagtggagtttgttgccggttcaa
tggagctccggaacaacgacgggaaccctgacaaggacatatccaggcgcgccgcaatct
gtgtttcgagaagacacgcttgccagaacgacaatcgattggacagttggtgcaacttgt
agttgtacatccggtggattctcgcttaatgaatttcaggtttctttgacgccaatcgtc
ttacttaggcagcgttacgacacgccggccatacgaagctctactcggagagatgaattg
gatcacgtgcgtgatctgaataattgggccaatggggcgaaatcggcggtagagatgttt
gaggatgccttcaagaatcaaacattcccaacggagcaggcttgtcttgtagccgcgcgt
gccgcaatgcaaagccacttgtcatcaagcatttatcccgctatcgatgcatcacggcag
aggtgggatgtgagcggcaagcatcgcttgatcattccgtag
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