KEGG   Stenotrophomonas acidaminiphila: AOT14_03040
Entry
AOT14_03040       CDS       T04107                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sacz  Stenotrophomonas acidaminiphila
Pathway
sacz00010  Glycolysis / Gluconeogenesis
sacz00020  Citrate cycle (TCA cycle)
sacz00260  Glycine, serine and threonine metabolism
sacz00280  Valine, leucine and isoleucine degradation
sacz00310  Lysine degradation
sacz00380  Tryptophan metabolism
sacz00620  Pyruvate metabolism
sacz00630  Glyoxylate and dicarboxylate metabolism
sacz00640  Propanoate metabolism
sacz00785  Lipoic acid metabolism
sacz01100  Metabolic pathways
sacz01110  Biosynthesis of secondary metabolites
sacz01120  Microbial metabolism in diverse environments
sacz01200  Carbon metabolism
sacz01210  2-Oxocarboxylic acid metabolism
sacz01240  Biosynthesis of cofactors
Module
sacz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sacz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sacz_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
sacz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sacz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sacz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AOT14_03040 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AOT14_03040 (lpdA)
   00620 Pyruvate metabolism
    AOT14_03040 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AOT14_03040 (lpdA)
   00640 Propanoate metabolism
    AOT14_03040 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AOT14_03040 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AOT14_03040 (lpdA)
   00310 Lysine degradation
    AOT14_03040 (lpdA)
   00380 Tryptophan metabolism
    AOT14_03040 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AOT14_03040 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sacz04147]
    AOT14_03040 (lpdA)
Enzymes [BR:sacz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AOT14_03040 (lpdA)
Exosome [BR:sacz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AOT14_03040 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Biotin_lipoyl Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GCV_H DAO GIDA NAD_binding_8 Biotin_lipoyl_2 HI0933_like AlaDh_PNT_C Thi4 RnfC_N FAD_binding_2 FAD_binding_3 DUF478 3HCDH_N
Other DBs
NCBI-ProteinID: ALJ26763
UniProt: A0A0S1AVI7
LinkDB
Position
350609..352756
AA seq 715 aa
MANTIEVKVPDIGDYSNVPVIEILVAVGDTVAKDQGLVTLESDKATLEVPSTAAGVVREI
KVKLDDKLSEGDVVVVLEAEGAAAAPAPAAAPAATPAPAAQPAAAAAPAAVSAPAAPAAT
GPVEVKVPDIGDYSGVPVIEILVAVGDTVKKDQGLVTLESDKATLEVPSTAAGVVKEIKV
KLGDKLSEGDVVVVLDAQGATPAAGAGNVAPGSRPPVTPSHRAPDPAVAARALPSTGRAA
DIECRMVVLGAGPGGYTAAFRSADLGMDTVLVERYASLGGVCLNVGCIPSKALLHAAEII
DHAAHADELGIAFGKPKITLDKLREYKEKVVGQLTKGLAGMARQRKVRTVQGEAKFVSAN
ELEITGDDGKTQLLRFEQCIIAAGSQAVKLPNFPWDDKRVMDSTDALELAEVPKSLLVVG
GGIIGLEMATVYSALGAQVTVVEFMDQLMPGADKDLVKPLAERLKKQGIEVHLKTKASGV
TSDKKGITVTFEAATEGEKPAMQSGTFDRVLVAVGRAPNGKKIDADKAGVEVTERGFIPV
DRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAFGEKKEWVARVIPSVAYTNPEI
AWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLVFDEETHRVIGGAIVGVH
AGELLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVAMASEIYDGTITDLYIPKKK
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggcgaacacgattgaagtcaaagtccccgacatcggcgattacagcaacgtgccggtg
atcgagatcctggtggccgtgggcgacacggtggccaaggaccagggcctggtgacgctg
gagtcggacaaggcgacgctggaagtgccgtccaccgccgccggcgtggtccgggagatc
aaggtcaagctcgacgacaagctgtccgagggcgacgtggtggtggtgctggaggccgaa
ggcgcggctgccgcgccggcgcccgccgctgccccggccgcgacccccgctcccgccgcg
cagccggccgccgcggccgctccggcggcggtcagtgcgccggcagccccggccgcaacc
ggcccggtcgaggtcaaggtgccggacatcggcgactacagcggcgtgccggtgatcgag
atcctggtggccgtgggcgatacggtgaagaaggaccaggggctggtgacgctggaatcg
gacaaggccacgctggaagtgccgtccaccgccgccggcgtggtcaaggagatcaaggtc
aagctcggcgacaagctgtccgagggcgacgtggtggtggtgctggacgcgcagggcgcc
acgcccgcggccggcgccggcaacgtggcgccgggcagcaggccgccggtgaccccgtcg
caccgcgcgccggacccggccgtggccgcccgcgcgctgccgtcgaccggccgcgccgcc
gacatcgaatgccggatggtggtgctgggcgccggcccgggcggctataccgccgcgttc
cgttcggccgacctgggcatggacacggtgctggtcgagcgctacgccagcctcggcggc
gtctgcctcaacgtcggctgcatcccgtccaaggcgctgctgcatgcggccgagatcatc
gaccatgccgcgcatgccgatgagctgggcatcgccttcggcaagccgaagatcaccctg
gacaagctgcgcgagtacaaggaaaaggtcgtcggccagctgaccaagggcctggccggc
atggccaggcagcgcaaggtgcgcaccgtgcagggcgaggccaagttcgtttcggccaac
gagctggagatcaccggcgacgacggcaagacccagctgctgcgcttcgagcagtgcatc
atcgccgccggctcgcaggcggtgaagctgccgaacttcccgtgggacgacaagcgcgtg
atggattccaccgacgcgctggaactggccgaagtgccgaagtcgctgctggtcgtgggc
ggcggcatcatcggcctggaaatggccaccgtgtacagcgcgctgggcgcccaggtcacc
gtggtcgagttcatggaccagctgatgccgggcgccgacaaggacctggtcaagccgctg
gccgagcgcctgaagaagcagggcatcgaagtgcacctgaagaccaaggcgtcgggcgtc
acctccgacaagaagggcatcaccgtgaccttcgaggccgccaccgagggcgagaagccg
gcgatgcagagcggcaccttcgaccgcgtgctggtggccgtgggccgcgcgccgaatggc
aagaagatcgatgccgacaaggccggcgtggaagtgaccgagcgtggcttcatcccggtc
gaccggcagatgcgcaccaacgtcccgcacatcttcgccatcggcgacatcgtcggtaac
ccgatgctggcgcacaaggccacgcacgagggcaagctggccgcggaagtcgccttcggc
gagaagaaggagtgggtggcgcgggtgattccgtcggtggcctacaccaacccggagatc
gcctgggtcggcgtcaccgagaccgaggccaaggccaaggggctgaaggtcggcgtggcc
aagttcccgtgggcggccagcggccgcgccatcggcatcggccgcaccgagggcttcacc
aagctggtgttcgacgaagagacccatcgtgtgatcggcggcgccatcgtcggcgttcat
gccggcgaactgctggccgagatcggactggccatcgagatgggcgccgaggccgaggac
atcggccacaccatccacgcccacccgacgctgagcgaatcggtggcgatggcttcggag
atctacgacggcaccatcaccgacctgtacatcccgaagaagaagtaa

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