Stenotrophomonas acidaminiphila: AOT14_06680
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Entry
AOT14_06680 CDS
T04107
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz00300
Lysine biosynthesis
sacz00470
D-Amino acid metabolism
sacz01100
Metabolic pathways
sacz01110
Biosynthesis of secondary metabolites
sacz01120
Microbial metabolism in diverse environments
sacz01230
Biosynthesis of amino acids
Module
sacz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AOT14_06680 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AOT14_06680 (dapF)
Enzymes [BR:
sacz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AOT14_06680 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ALJ27106
UniProt:
A0A0S1AWG6
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All DBs
Position
753582..754418
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AA seq
278 aa
AA seq
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MPRLRFTKMHGAGNDFVVLDLRDGAPPPDAGLAARLADRHRGVGCDQILTIEPPRAAGSV
ASYRIWNSDGSTSQQCGNGARCVGAWLVRDGAAQGDEFLIDSPLRTHVVRRLDAGHYAVA
MGRPEFEPARIPLIGFPRAREEYVVPLQGENVRFGAVSMGNPHAVLEVGLIDAAPVERIG
PLLQQHASFPESVNVGFAQVLGPGHVRLRVFERGVGETLACGSGACAAAVVLMQRGRLAR
DAVMSLPGGDLRIQWPADDAQIVMSGPAAFVFDGEWMG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgcgtttcaccaagatgcatggcgccggcaacgatttcgtggtgctggac
ctgcgcgatggcgcaccgccgcccgacgccggccttgccgcgcgcctggccgaccgccac
cgtggcgtcggctgtgaccagatcctgaccatcgaaccgccgcgtgccgccggctcggtg
gcctcgtaccggatctggaactccgatggctccacctcccagcagtgcggcaacggcgcg
cgctgcgtgggcgcctggctggtacgcgacggcgcggcgcagggggatgagttcctgatc
gacagtccgctgcgcacgcatgtcgtgcggcgcctggacgcagggcattacgcggtggcg
atgggccggcccgagttcgagccggcgcggattccgctgatcggcttcccgcgcgcgcgc
gaggaatacgtggtgccgctgcagggcgagaacgtgcgcttcggcgcggtgtcgatgggc
aacccgcacgcggtgctggaggtgggcctgatcgacgcggcaccggtggagcggatcggt
ccgctgctgcagcagcatgcgtcgttccctgagtcggtgaacgtcggtttcgcccaggtg
ctgggccccggccacgtgcgcctgcgggtgttcgagcgcggcgtcggcgagaccctggcc
tgtggcagtggcgcctgcgcggcggcggtggtgctgatgcagcgcggccggctggcgcgc
gatgcggtgatgtcgctgccaggcggcgacctgcgcatccagtggccggccgacgatgcg
cagatcgtgatgtccggcccggcggccttcgtattcgatggagagtggatgggatga
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