Stenotrophomonas acidaminiphila: AOT14_08800
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Entry
AOT14_08800 CDS
T04107
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOT14_08800 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacz03021
]
AOT14_08800 (rpoA)
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_08800 (rpoA)
Enzymes [BR:
sacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOT14_08800 (rpoA)
Transcription machinery [BR:
sacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOT14_08800 (rpoA)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOT14_08800 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALJ27311
UniProt:
A0A0R0E0Z5
LinkDB
All DBs
Position
987426..988424
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDTRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDSATISLSKQGPGVVTAADIKVDHN
VEVLNGEQIICNLTKDTAINMRLKVERGFGYQPAASRRRPDEETRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVSAHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgtccccgcggtccgcagatcgaacgccttacc
gacacccgcgccaaggtcgttatcgagcccttggagcggggttacgggcatacgctgggc
aatgccctgcgtcgcgtgctgctgtcgtccatcccgggcttcgccatcacggaagtcgag
atcgacggcgtgctgcatgagtacaccacggtcgaagggctgcaggaggacgtgctcgaa
gtcctgctcaacctgaaggacgtggccatccgcatgcattccggtgacagtgccaccatc
tccctgtccaagcagggtccgggtgtggtgactgccgccgacatcaaggtcgaccacaac
gtcgaagtcctcaacggcgagcagatcatctgcaacctgaccaaggacacggcgatcaac
atgcgcctgaaggtcgagcgtggcttcggctaccagccggcggcttcgcgtcgtcgtccg
gacgaagaaacccgtgccatcggccgcctggtcctggacgcctcgttctcgccggtccgc
cgcgtcgcctacgccgtggaagcggcccgcgtcgaacagcgcaccgacctggacaagctg
gtcatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtccgcaccgcggcc
gacatcctcagcgatcagctctcggtgttcggtgacttcacccaccgcgaccgcggtgcg
gccaagccggccaacaacggcgtggatccggtactgctgcgcccgatcgacgacctggag
ctgaccgtccgttcggccaactgcctgaaggccgaaagcatctactacatcggcgatctg
atccagaagaccgaagtggagctgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtctccgcccacggcatgctgggctga
DBGET
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