Stenotrophomonas acidaminiphila: AOT14_12400
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Entry
AOT14_12400 CDS
T04107
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_12400 (radA)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOT14_12400 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DUF7125
AAA_16
AAA_22
DnaB_C
GvpD_P-loop
Lon_C
AAA_24
SLFN-g3_helicase
nSTAND_NTPase5
PAXNEB
Rad51
AAA_30
nSTAND3
GvpD_bR2
Zn_Ribbon_1
zf-C2H2_6
NACHT
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ALJ27644
UniProt:
A0A0S1AXU0
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All DBs
Position
1399620..1400996
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AA seq
458 aa
AA seq
DB search
MAKNRTAYVCSECGAEYSKWQGQCGECGAWNVLAEVVLESAAAAKAPAARRGGWAGKLEP
PKITALKDVQQSEHARVSTGIGEFDRVLGGGLVEGAVVLVGGDPGIGKSTLLLQALARMA
GSLPVLYVTGEESLAQVAGRAVRLDLPLDGLDALAETGVELILQHAAAARPRLIVADSVQ
TLWTETLTAAPGSVSQVRESAARLVRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAV
LYFEGESGSRFRVLRAFKNRFGAVNELGVFAMGDKGLKEVPNPSAIFLSGGSTRQPGSCV
MVTREGTRPLLVEVQALVDSSPLSNPRRVAVGLEQNRLAMLLAVLHRHGGVMVGDQDVFI
NVVGGIRVQETAVDLPVLLAVLSSLRDQPLAEKTIAFGEVGLSGEIRPVPNGEERLREAA
THGFKRAIVPRANAPKAGSVKGMEVIAVERLAEAIEAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaccgcaccgcctatgtctgcagcgaatgcggcgccgagtacagcaaatgg
cagggccagtgcggcgaatgcggcgcctggaacgtcctggccgaggtggtgctggaaagc
gcggccgcggcgaaggcgccggccgcgcgccgcggcggctgggccggcaagctcgagccg
ccgaagatcaccgcgctcaaggacgtgcagcagagcgagcatgcgcgggtgtccaccggc
atcggcgagttcgaccgggtgctgggcggcggcctggtcgaaggcgcggtggtgctggtc
ggcggcgaccccggcatcggcaaatcgaccctgctgctgcaggcgctggcgaggatggcc
ggcagcctgccggtgctgtacgtgaccggcgaggaatccctggcgcaggtggccgggcgc
gcggtgcgcctggacctgccgctggacgggctggatgcgctggccgagaccggtgtcgaa
ctgatcctgcagcacgccgccgcggcgcgccccaggctgatcgtcgccgactcggtgcag
acgctgtggaccgagacgctgacggccgcgccgggctcggtcagccaggtgcgcgagagc
gcggcacggctggtgcgctttgccaaggagaccggcaccgcggtgttcctggtcggccac
gtcaccaaggagggcggcatcgccggcccgcgcgtgctcgagcacatggtcgacgcggtg
ctgtacttcgagggcgagagcggcagccgcttccgggtgctgcgcgcgttcaagaaccgc
ttcggcgcggtcaacgaactgggcgtgttcgcgatgggcgacaaggggctgaaggaagtg
cccaatccctcggccatcttcctgtccggcggcagcacgcgccagcccggcagctgcgtg
atggtcacccgcgagggcacccggccgctgctggtggaggtgcaggcgctggtcgattcc
tcgccgctgtccaacccgcgccgggtcgcggtgggactggagcagaaccgcctggcgatg
ctgctggcggtgctgcaccgccatggcggggtgatggttggcgaccaggacgtgttcatc
aacgtggtcggcggcatccgcgtgcaggagaccgcggtcgacctgccggtgctgctggcg
gtgctgtcgtcgctgcgcgaccagccgttggcggagaagaccatcgccttcggcgaggtc
gggctgtccggcgagatccgcccggtacccaatggcgaggagcgcctgcgcgaggcggcc
acccatggtttcaagcgcgccatcgtaccccgcgccaacgcgcccaaggccggttcggtc
aagggcatggaggtgatcgcggtcgagcggctggccgaagcgatcgaggcggcctga
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