KEGG   Stenotrophomonas acidaminiphila: AOT14_14240
Entry
AOT14_14240       CDS       T04107                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sacz  Stenotrophomonas acidaminiphila
Pathway
sacz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sacz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AOT14_14240 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sacz03400]
    AOT14_14240 (uvrB)
DNA repair and recombination proteins [BR:sacz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOT14_14240 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOT14_14240 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22
Other DBs
NCBI-ProteinID: ALJ27826
UniProt: A0A0S1AYL6
LinkDB
Position
1599001..1601184
AA seq 727 aa
MQGFPVERRAARLQADWADTLATGIGRRVQAGMGNVLSRPSSVRWLYLPVHTAGAAMSDR
FQLVSPYSPAGDQPAAIAKLVANFEAGIAKQTLLGVTGSGKTYTIANVVQQVQRPTLVMA
PNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEHIEQMRL
AATKTLLSRPDALVVATVSAIYGLGAPEDYLSLRLILSKGERIDQRDLIKHLTQLQYTRN
EYELQRGTFRVRGEVIDVFPAESDSEAVRIELFDGEVEQLGMFDPLTGESLRRMQRYTIY
PKTHYATTRERVLAAIETIKAELKERLEQLYAQNKLVEAQRLAQRTQFDLEMMAEVGYCS
GIENYSRHLTGKAAGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKETLVEF
GFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESGDEITELVVRPTGLVDPQVE
IRPVATQVDDLMSECHARISMGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDVDTVE
RVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAAR
NLRGKAILYADRITRSMQAAIDETDRRRQKQVEHNEAHGIVPKSVARPIIDILEGAHEEG
SAKSGAKGKGRRVAEPEADYLSLEPARLAARIKELEQRMYQHARDLEFEDAARVRDQIRR
MKEASLG
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcagggctttcccgtggaacggcgcgcagcgcgcctgcaggcagactgggccgatacg
ctggcgacgggaatcggtcgcagggtgcaggcgggcatgggaaatgtcctcagccggccg
tcatccgtgcgatggctatacttgccggtccataccgccggcgccgccatgtccgaccgt
ttccagctcgtatcgccctattcgccggcaggcgaccagccggccgcgatcgccaaactc
gtcgccaacttcgaggccggcatcgccaagcagaccctgctgggcgtgaccgggtcgggc
aagacctacaccatcgccaacgtggtgcagcaggtccagcggccgaccctggtgatggcg
ccgaacaagacgctggcggcgcagttgtatggcgagttcaagtcgttcttcccgcacaac
gcggtcgagtacttcgtcagctactacgactactaccagcccgaggcctacgtgccggcc
tcggataccttcatcgagaaggacagctcgatcaacgagcatatcgagcagatgcggctc
gccgcgaccaagaccctgctgtcacggcccgatgccctagtggtggcgacggtctcggcg
atctatggcctcggtgcgcccgaggactacctgtcgctgcggctgatcctgtccaagggc
gagcgcatcgaccagcgcgacctgatcaagcacctgacccagttgcagtacacccgcaac
gagtacgaactgcagcgcggcaccttccgcgtgcgcggcgaggtcatcgacgtgtttccc
gccgagtcggacagcgaggcggttcgcatcgagctgttcgatggcgaagtcgagcagctg
ggcatgttcgacccgctcaccggcgagagcctgcgcaggatgcagcgttacacgatctac
cccaagacccactacgccaccacccgcgaacgggtgctggcggcgatcgagacgatcaag
gccgagctcaaggagcggctggagcagctgtacgcgcagaacaagctggtcgaggcgcag
cgcctggcccagcgtacccagttcgacctggagatgatggccgaggtcggctactgcagt
ggcatcgagaattactcgcggcacctgaccggcaaggccgccggcgagccgccgccgacc
ctgttcgactacctgccgccggacgcgttgctggtgatcgacgaatcgcacgtgaccatc
ccgcagatcggcgcgatgtacaagggcgaccgctcgcgcaaggagacgctggttgagttc
ggcttccgcctgccatcggcgctggacaaccgcccgctgcgtttcgaggagtgggaggcg
cgctcgccgcgcagcatctacgtatcggccacccccggaccctatgagctgcgcgagtcg
ggcgacgagatcaccgagctggtggtgcgcccgaccggcctggtcgacccgcaggtcgag
atccggccggtggccacccaggtcgacgacctgatgtccgagtgccacgcgcgcatcagc
atgggcgaccgcgtgctggtcaccaccctgaccaagcgcatggccgagaacctcaccgag
tacctcggcgagcatggcatccgcgtgcgctacctgcattcggacgtggatacggtcgag
cgcgtggagatcatccgcgacctgcgcctgggcaagttcgacgtgctggtcggcatcaac
ctgctgcgcgaaggcctggacatgccggaagtctcgctggtggcgatcctggatgcggac
aaggaaggcttcctgcgttcgaccggctcgctgatccagaccatcggccgcgccgcccgc
aacctgcgcggcaaggcgatcctctatgccgacaggatcacccgctcgatgcaggcggcc
atcgacgagaccgaccgccgtcgccagaagcaggtggagcacaacgaggcgcacggcatc
gtgcccaagtcggtggcgcggccgatcatcgacatcctcgagggcgcgcatgaagaggga
tcggccaagtccggcgccaagggcaaggggcggcgggtggcagagcccgaggccgactat
ctgtcgctggagccggccaggctggcggcccgcatcaaggagctggaacagcggatgtac
cagcatgcgcgcgacctggagttcgaggacgcggcgcgggtgcgcgaccagatccgccgc
atgaaggaagcaagcctgggatga

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