Stenotrophomonas acidaminiphila: AOT14_18110
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Entry
AOT14_18110 CDS
T04107
Name
(GenBank) DNA/RNA helicase superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz03420
Nucleotide excision repair
sacz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT14_18110
03430 Mismatch repair
AOT14_18110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_18110
Enzymes [BR:
sacz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOT14_18110
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT14_18110
MMR (mismatch excision repair)
Other MMR factors
AOT14_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALJ28190
UniProt:
A0A0S1AZF5
LinkDB
All DBs
Position
complement(1992179..1993267)
Genome browser
AA seq
362 aa
AA seq
DB search
MSSVPSPNQVLLSAAGSGKTTMLVRQSLARPQRRIAILTYTLENLEEIRRAFERQAGAVP
AHVSLYSWYSFLLRECIRPYQAALCAQPRVESILFVEGRTNNRAPRSQVARHYLAGDRIY
SDRAADFAVRCDELTQGRVIERLAAMYDELYIDEVQDLAGYDLDLVERLLSSGIEITLVG
DTRQATYATNHSPRHQQYRGVAMMGLFQAWQARNLCQIQHRVISHRCAQSLCDLADALYP
QMPRTESGNSELTGHEGIYVVAPTLVQKYVLQFAPTVLRYDRREACDGYPAVNFGQAKGR
TYSRVLIYPNGPLAQFLRTADASRITSPAKYYVAFTRARQSVAFVLAGACAWPGHQVYES
RD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgtgccatcgcctaatcaggtactgctctcggcggccggttcgggcaagacg
acgatgttggtgcgccagtccctggcgcgcccgcaacgccggatcgccatcctgacctac
acgcttgagaacctggaagagatcaggcgcgcgtttgaacggcaggctggcgccgtgccg
gcgcacgtgtcgctctacagttggtacagctttctgctgcgcgagtgcattcggccctat
caggcggcgctgtgtgcccagccccgcgtggagtccatcctcttcgttgagggcaggacc
aacaatcgtgctccccgtagtcaggtggctcgtcactatctggccggcgatcgaatatat
tccgatcgcgccgctgactttgccgtgcgctgcgatgagcttacccaaggccgtgtcatc
gagcgtttggcggccatgtacgacgagctctacatcgatgaggtccaggacttggccggc
tacgacctggacctggtcgagcgcctgctctccagcggtatcgagatcacgctggtgggt
gatacccgccaggcgacctacgccaccaaccattctccgcgtcaccagcaataccgtggt
gtggccatgatggggcttttccaagcctggcaggcgcggaacttgtgtcagatccagcat
cgggtgatcagccaccgctgtgcgcagtcgctgtgtgatctggccgatgcgctgtatccg
cagatgccgcgcaccgagtcaggaaatagcgagctgaccgggcatgagggcatttatgtg
gtggcacccactctggtgcaaaaatatgtactgcagttcgcgcccaccgtcctgcgttac
gaccggcgggaagcctgcgatggctatcctgcggtcaactttggacaagccaagggacgg
acatactcccgcgtgctgatctatcccaatggccccctggcccagttcctgcgcaccgct
gacgcctcccgtatcacctcaccggcgaagtactacgtggcgttcacgcgggcccggcaa
agcgtggcctttgtcctggcaggcgcctgcgcctggccagggcaccaagtctatgagtcc
cgagactag
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integrated database retrieval system
