Stenotrophomonas acidaminiphila: AOT14_22020
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Entry
AOT14_22020 CDS
T04107
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sacz03009
]
AOT14_22020 (rluC)
Enzymes [BR:
sacz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AOT14_22020 (rluC)
Ribosome biogenesis [BR:
sacz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AOT14_22020 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
ALJ28576
UniProt:
A0A0R0E5H9
LinkDB
All DBs
Position
complement(2423183..2424172)
Genome browser
AA seq
329 aa
AA seq
DB search
MTDSEDRRIPPAGKSSVRLIKVPEDRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRVNG
GRAKAERKLEAGEEVRVPPVNLAEVGDKAPPPAGFLQRMEQAIVFEDARLLVINKPSGVA
SHGGSGISHGAIETMRALRPNQGLELVHRLDRDTSGLLVMAKKRSALSELQALLREDHDG
TGPGGIRKRYLTLLVGRMPDGVMSVDAPLHVGLRQGGERHVQVNAAGKPSLSHFRVLERR
GGHSYCEVKIDTGRTHQIRVHAQHIGHPVAGDDKYGDPAVNKRLREQIGLKRLFLHAASL
EFALDGGKVPYVLNAPLAPELAEALDRLR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccgaagaccgccgcataccgcctgcgggcaaatccagcgtgcgcctgatc
aaggttccagaagaccgggccgggcagcggctggacaacttcctgctcggccagctcaag
ggcgccccgcgcagcctggtctataaactggtgcgcagcggccaggtgcgggtcaatggc
ggccgagccaaggccgagcgcaagctggaggcgggcgaggaggtgcgcgtgccgccggtc
aatctcgccgaggtcggagacaaggcgccgccgccggccggcttcctgcagcgcatggag
caggccatcgtgttcgaggacgcgcggctgctggtcatcaacaagccttccggggtggcc
agccatggcggcagcggcatcagccatggcgcgatcgaaaccatgcgcgccctgcgtccg
aaccaggggctggaactggtgcaccggctggatcgcgacacctcggggctgctggtcatg
gccaagaagcgctcggcgctgtccgagctgcaggcgctgctgcgcgaggaccacgacggc
accgggcccggcggcatccgcaagcgttacctgaccctgctggtcgggcgcatgcccgac
ggggtgatgagcgtggatgcgccgctgcacgtgggcctgcgccagggcggcgaacgccat
gtgcaggtgaatgcagccggcaagccatcactgagccatttcagggtgctggagcggcgc
ggcggtcattcgtactgcgaggtgaagatcgataccgggcgtacccaccagatccgcgtg
catgcccagcacatcggtcatccggtcgccggtgacgacaagtacggcgatcccgccgtc
aacaagcggcttcgcgagcagatcgggctgaagcggctgttccttcacgccgcctcgctg
gagttcgcgctcgatggcggcaaagtgccctatgtgctcaacgcaccgctggcgccggaa
ctggccgaggcgctggaccggctgcgctga
DBGET
integrated database retrieval system
