Stenotrophomonas acidaminiphila: AOT14_23750
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Entry
AOT14_23750 CDS
T04107
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_23750
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AOT14_23750
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_22
AAA_25
AAA_30
CbiA
nSTAND_NTPase5
T2SSE
TrwB_AAD_bind
VSG_B
Motif
Other DBs
NCBI-ProteinID:
ALJ28741
UniProt:
A0A0S1B0Y5
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All DBs
Position
2623179..2624684
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AA seq
501 aa
AA seq
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MDPILIGKGITDDIAVTLLPRFGNRHGLVAGATGTGKTVTLMTLAEGFSRLGVPVFLADV
KGDVAGLAVPGDGSEKLAQRAAEIGVAGYAPAASPVVFWDLYGQLGHPVRTTVSEMGPTL
LARILELNDTQAGVLDIVFKLADDRGLLLLDLDDLRALLNLVAEERKDVSTEYGLVSAQS
VAAIQRALLRLSQDGGEKFFGEPALELADIMRVNHDGRGVIGILAAAQLILKPRLYSTFL
LWLLSELFEKLPEVGDLEKPKLVFIFDEAHLLFDDAPAALVQRIEQVVRLIRSKGVGVYF
CSQFPDDVPANILGQLGNRVQHALRAFTPRDQKAVKTAAETFVPNPRLDVVATLSQLGTG
EALVSTLQDKGVPSPVQKTLVAPPRCRMGSITDAERSQVRAGSPVAGRYDNAVNRESAAE
ILARRTQQAAEQAKAPAARTREQDDGQEGGFSQAIKDAIFGTRRRQGMIETMAKQTTRTV
GTKLGNQIVRGILGGIFGGKR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaccccatcctgatcggcaagggcatcaccgacgacatcgccgtcaccctgcttccg
cgcttcggcaaccgccatggcctggtggccggcgccaccggcaccggcaagacggtgacg
ctgatgaccctggccgagggtttctcgcggctgggcgtaccggtgttcctggccgacgtg
aagggcgacgtggccggcctggccgtgcccggcgacggcagcgagaagctggcccagcgc
gccgccgagatcggcgtggccggctatgccccggccgccagcccggtggtgttctgggac
ctgtacggccagctcggccacccggtgcggaccacggtcagcgagatggggccgaccctg
ctggcgcgcatcctcgaactcaacgacacccaggccggggtgctcgacatcgtgttcaag
ctggccgacgaccgcggcctgctgctgctcgaccttgacgacctgcgcgccctgctcaac
ctggtggccgaggagcgcaaggacgtgtccaccgagtacgggctggtcagcgcgcagtcg
gtggcggcgatccagcgtgcgctgctgcgcctgtcgcaggacggcggcgagaagttcttc
ggcgaaccggcgctggaactggccgacatcatgcgcgtcaaccacgacggccgcggggtg
atcggcatcctcgccgcggcgcagctgatcctcaagccgcgcctgtattcgaccttcctc
ctgtggctgctgtccgagctgttcgagaaactgccggaagtgggcgacctggagaagccg
aagctggtcttcatcttcgacgaggcgcacctgctgttcgacgacgccccggccgcgctg
gtgcagcgcatcgagcaggtggtgcggctgatccgctccaagggcgtgggcgtgtatttc
tgctcgcagttccccgacgacgtcccggccaacatcctcggccagctcggcaaccgcgtg
cagcacgcgctgcgcgccttcaccccgcgcgaccagaaggcggtgaagaccgcggccgag
accttcgtcccgaacccccggctcgacgtggtcgccacgctgtcgcagctgggcaccggc
gaggcactggtgtccaccctgcaggacaagggggtgccttcgcccgtgcagaagaccttg
gtggccccgccacgctgccgcatggggtcgatcaccgatgccgagcgctcccaggtgcgt
gccggcagcccggtggcaggacgctacgacaacgcggtcaaccgcgaatcggcggccgag
atcctggcccggcgcacgcagcaggcagccgaacaggccaaggcgccggccgcccgcacc
cgcgaacaggacgatggccaggaaggcggcttcagccaggccatcaaggacgccatcttc
ggcaccaggcgccgccagggcatgatcgagaccatggccaagcagaccacgcgcacggtc
ggcaccaaactgggcaaccagatcgtgcgcggcatcctcggcgggatattcggcggcaag
cgctga
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