Stenotrophomonas acidaminiphila: AOT14_24190
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Entry
AOT14_24190 CDS
T04107
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz03030
DNA replication
sacz03430
Mismatch repair
sacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOT14_24190 (holA)
03430 Mismatch repair
AOT14_24190 (holA)
03440 Homologous recombination
AOT14_24190 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacz03032
]
AOT14_24190 (holA)
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_24190 (holA)
Enzymes [BR:
sacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOT14_24190 (holA)
DNA replication proteins [BR:
sacz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOT14_24190 (holA)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOT14_24190 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ALJ28784
UniProt:
A0A0S1B120
LinkDB
All DBs
Position
complement(2675826..2676869)
Genome browser
AA seq
347 aa
AA seq
DB search
MELRPEQLASQAGAQPLAPVYLIAGPELLRVLEAADAVRAKARAEGIGEREVFDADGRDF
DWGQLASSFNAPSLFSARRLVELRLPGGKPGKEGAEVISAFCAQPPADVVLLITAGEWSK
SHHGKWADAVARAGVLSVAWAIKPHELGDWIERRLRSRGLRAEPAAVQRLSERVEGNLLA
AAQEIDKLALLAEGQTLDVAKMEALVADAARYDVFRLVEAAFSGQPQAVVRMLAGLRAEG
EAVAALTPILIRELLLTAGLARVQAGGGNLAGEMKARGIWESRQAPFKRALQRHPAAQRW
ERFVAEAGQVDRMAKGRADGDPWLALERLLLAVAEAQAVRLLARGTR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtcccgagcagcttgccagccaggccggtgcccagccgctggcgccggtc
tacctgatcgccgggccggaactgctgcgtgtgctggaagcggccgatgcggtgcgcgcg
aaggcgcgtgccgagggcatcggcgagcgtgaggtattcgatgccgacgggcgcgatttc
gactgggggcaactggcgtccagtttcaacgcgcccagcctgttcagtgcgcggcggctg
gtggagctgcggctgcccggcggcaagccgggcaaggagggcgcggaggtgatcagcgcg
ttctgcgcgcagccgccggccgacgtggtgctgctgatcaccgccggcgagtggagcaag
tcgcaccatggaaaatgggccgatgcggtggcgcgcgccggcgtgctgtcggtggcctgg
gcgatcaagccgcacgaactgggcgactggatcgagcgtcgcctgcgctccagggggctg
cgagccgaaccggccgcggtacaacgcctgagcgagcgcgtggagggcaacctgctggcc
gccgcgcaggaaatcgacaagctggcgctgctggccgaagggcagacgctggacgtggcg
aagatggaggcgctggtcgccgatgccgcgcgctacgacgtgttccggctggtcgaggcc
gcgttctccgggcagccgcaggcggtggtgcggatgctcgccgggctgcgcgccgagggc
gaggcggtggccgcgctgaccccgatcctgatccgcgagctgctgctcaccgccggactg
gcgcgggtgcaggccggtggcggcaatctcgccggtgaaatgaaggcgcgcggcatctgg
gagtcgcggcaggcgccgttcaagcgcgcgctgcagcgacatccggcggcacagcgctgg
gaacgtttcgtggccgaggccggccaggtcgaccgcatggccaagggccgtgccgatggc
gatccgtggctggcgctggagcgcctgctgctggcggtggccgaggcgcaggcggtgcgc
ctgctggcgcgcgggacgcgctga
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