Stenotrophomonas acidaminiphila: AOT14_24950
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Entry
AOT14_24950 CDS
T04107
Symbol
dnaE_3
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz03030
DNA replication
sacz03430
Mismatch repair
sacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOT14_24950 (dnaE_3)
03430 Mismatch repair
AOT14_24950 (dnaE_3)
03440 Homologous recombination
AOT14_24950 (dnaE_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sacz03032
]
AOT14_24950 (dnaE_3)
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_24950 (dnaE_3)
Enzymes [BR:
sacz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOT14_24950 (dnaE_3)
DNA replication proteins [BR:
sacz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOT14_24950 (dnaE_3)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOT14_24950 (dnaE_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Ferredoxin_N
Motif
Other DBs
NCBI-ProteinID:
ALJ28857
UniProt:
A0A0S1B1I5
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All DBs
Position
2763906..2767493
Genome browser
AA seq
1195 aa
AA seq
DB search
MSTPRFVHLHVHTEFSMVDSTIRVPAKPDQADPKKAKQANLLSRSVEMQAPALAVTDLNN
MFALVKFYKAAEGVGIKPIAGADVLIAEDGHDPWRMTLLCRDRDGYLSLSRLLSRAWLEG
HRPEGGVAVHPQWLKDGCHNLFALAGRQSLAGRLAGEGRHDLAEQQLADWQRVFGDGLHL
ELTRTGRDGEEAFNQFALMAAGQRGLPVIASNDVRFLSPQDFDAHEARVCISTGRVLDDP
KRPREYSREQYLKSPQQMCELFADIPDAIDNTLALAQRCNVEMRLGTYFLPNYPVPDDET
LDTWIQKQSRKGLEERLQKNPLAPGKTREDYFERLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDSGRVLGFPYGLVDGVSKLIPNILGIG
LKDALGKGKEGPDSEMASAELIQRYQSEDDVRDLIDLALQLEDLTRNAGKHAGGVVIGPE
PLSEFCPLYAEHDEGSLGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINRRH
ERAGIPPVDIAAIPLDDAPTYKDIFANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALV
SLYRPGPMDLIPSFNARKHGQEEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSL
GGADLLRRAMGKKVPAEMAKHREIFREGAAKGGVDGPKADEIFDLMEKFAGYGFNKSHAA
AYALVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLAEVRNLGLRVEPPRVNESAYM
FEASSADTIRYGLGAIKGVGQGACEAVVAERLRGGEYGSLLDFCARVESAKLNRRTLEAM
IQCGALDGLGRNRASLMLQLPEVLKATDQMAREKASGQNSLFGAPDPVNAAAQLDLPESR
EWPVAQLLAGERETLGFYLSGHPFDPYAEDVKELVGTDLGALDKLVAPAPPPRDGEKRGW
RQEAQVILAGMVVGMRRKGDSQVFVQLEDGKGRVECSAFSDGLAEFGHLMTKDRILVVKG
GLREDEFNGGYALRIRQCWDFEQLCADHAVRLSLRVDGRGGPIWQRIEPLLATHRPGRTP
IRLDLLLKGRDGGVAGMLDLGGAGAVRVSTQLLDALREDPAVRRVKLAYSPPWAS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagcactccccgcttcgtccacctccacgtccacaccgaattctcgatggtggactcc
accatccgcgtcccggccaagccggaccaggccgatccgaagaaggccaagcaggccaac
ctcctcagccgctcggtggaaatgcaggcgccggcgcttgcggtcaccgacctgaacaac
atgttcgcgctggtgaagttctacaaggccgccgaaggcgtgggcatcaagcccatcgcc
ggtgccgacgtgctgatcgccgaggatggccacgacccgtggcgcatgaccctgttgtgc
cgcgaccgcgacggctacctgagtctgtcgcgcctgctcagccgggcctggctggaaggc
catcgccccgagggcggcgtcgccgtccacccgcaatggctgaaggacggttgccacaac
ctgttcgcgctggccgggcgccagagcctggccgggcgcctggccggcgaaggccgccat
gacctggccgaacagcagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gagctgacccgcaccggccgcgacggcgaggaagcgttcaaccagttcgcgctgatggcc
gccggccagcgcggcctgccggtgatcgccagcaacgacgtgcgcttcctgtcgccgcag
gacttcgacgcgcacgaggcacgggtgtgcatctccaccggccgggtgctcgacgacccc
aagcgcccgcgcgagtacagccgcgagcagtacctgaaatcgccgcagcagatgtgcgag
ctgttcgccgacatccccgacgccatcgacaacacgctggcgctggcgcagcgctgcaac
gtcgagatgcggctgggtacctacttcctgcccaactacccggtgcccgacgacgagacc
ctggacacctggatccagaagcagtcgcgcaaaggcctggaagaacgcctgcagaagaac
ccgctggcgccgggcaagacccgcgaggactatttcgagcggctcgagttcgagctcgac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggtatcccgatcggcccgggccgcggctcgggcgccggctcgctggtg
gcgtgggcgctgaagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctcaacccggaacgcgtgtcgatgcccgacttcgacatcgatttctgcatggaccgc
cgcgacgaggtgatcgactatgtcgcgcgcaagtacggccgcgagcgggtcagccagatc
atcacctacggcaccatggcggccaaggcggtggtgcgcgactccgggcgcgtgctcggc
ttcccgtacggcctggtcgacggcgtgtccaagctgatccccaacatcctcggcatcggc
ctgaaggacgcgctgggcaagggcaaggaagggccggattcggaaatggcctcggccgag
ctgatccagcgctaccagagcgaggacgacgtccgcgacctgatcgacctggcgctgcag
ctggaagacctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgggcccgag
ccgctgtccgagttctgcccgctgtacgccgaacacgacgaaggcagcctgggcaagaac
ccggtcacccagttcgacaagaacgacgtggaggaagtgggcctggtgaagttcgacttc
ctcggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaaccggcgccac
gaacgcgccggcatcccgccggtggacatcgccgcgatcccgctcgacgacgcgcccacc
tacaaggacatcttcgccaacggcaacaccggcgcggtgttccagttcgaatcctcgggc
atgcgccggctgctgaaggacgcgcgcccggaccgcttcgaggacctgatcgcgctggtg
tcgctgtaccgccccggcccgatggacctgatcccctcgttcaacgcgcgcaagcacggc
caggaagagatcatctatcccgatccgcgcaccgaagccatcctgaaggacacctacggc
atcatggtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctg
ggcggcgccgacctgctgcgccgcgcgatgggcaagaaggtgccggcggagatggccaag
caccgcgagatcttccgcgaaggcgcggccaagggcggcgtcgacggccccaaggccgac
gagatcttcgacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgcc
gcctacgccctggtcagctaccagaccgcctggctcaagcgccactacccggccgagttc
atggccgcgacgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctggcc
gaggtacgcaacctcggcctgcgcgtggagccgccacgggtcaacgaatcggcctacatg
ttcgaggcatcctcggccgacaccatccgttacggactgggcgcgatcaagggcgtcggc
cagggcgcctgcgaagcggtggtggccgagcgcctgcgcggcggcgagtacggctcgctg
ctggatttctgcgcgcgggtggaatcggccaagctcaaccggcgcaccctggaggcgatg
atccagtgcggcgcgctcgacggcctcggccgcaaccgcgcttcgctgatgctgcagctg
cccgaggtgctcaaggccaccgaccagatggcgcgcgagaaggcatcgggccagaactcg
ctgttcggcgcgcccgacccggtcaacgccgccgcgcagctggacctgccggaaagccgc
gaatggccagtggcgcagctgctggccggcgagcgcgagacgctgggcttctacctcagc
ggccatccgttcgacccgtatgccgaggacgtcaaggaactggtcggcaccgacctgggc
gcgctggacaagctggtggcgccggcaccgccaccgcgcgacggcgaaaagcgcggctgg
cgccaggaagcgcaggtgatcctggccggcatggtcgtgggcatgcgccgcaagggcgac
agccaggtgttcgtgcagctggaggacggcaagggccgggtcgagtgcagcgccttctcc
gatggcctggccgaattcggccacctgatgaccaaggaccgcatcctggtggtcaagggc
ggcctgcgcgaggacgagttcaacggcggctatgccctgcgcatccgccagtgctgggat
ttcgagcagctgtgcgccgaccacgcggtgcgcctgtcgctgcgcgtggacggccgcggc
ggccccatctggcagcgcatcgagccgctgctggccacgcaccgccccgggcgcacgccg
atccgcctggacctgctgctgaagggcagggacggcggtgtcgccggcatgctcgacctc
ggcggcgccggtgcggtgcgggtcagcacgcaactgctcgacgccctgcgcgaggacccc
gcggtacgccgcgtcaagctcgcctacagcccgccctgggccagctga
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