Stenotrophomonas acidaminiphila: AOT14_37310
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Entry
AOT14_37310 CDS
T04107
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sacz
Stenotrophomonas acidaminiphila
Pathway
sacz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOT14_37310 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacz03400
]
AOT14_37310 (recC)
Enzymes [BR:
sacz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOT14_37310 (recC)
DNA repair and recombination proteins [BR:
sacz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT14_37310 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALJ30061
UniProt:
A0A0S1B4V9
LinkDB
All DBs
Position
complement(4109653..4113009)
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AA seq
1118 aa
AA seq
DB search
MPDASADFRLYHSNALDVLASLLAHALREPDPGRPLLAADTVLIPQVAMRRWLQSTLAAE
YGIAANLEFLTPGEFVARALKENVPGEQDDLGAAGLHWRLYAALTDAALMRQPAMAALRA
YLAGNAPGGDDPLRAWSLAAELGGVFEKYQAWRRDWLLRWEAGADAADPQAILWRHIAAG
QQHRARRINDYLARFEGAGQPLPRGLPSRLFAFATLNVSPDVLRVIATQARVGTLHFYLP
TPTRAYWGDLQTLAERLRGGIDDPFGSAAGENPLLQAWGAAGRDFMAVLGSYEVVHPSGE
IAAYADPERREGPTLDQGGLSDSLLHRLQADLFHRRARPPAPLRPALRVDDPSVQVHACH
TRLREMQVLHDQLRALLDDPRFDPPLQPREIAVLAPDIDPYVPYLESVFGGRGGGEGHIP
WALADASPLQGEPLAEVFVQLLGLPVSRFGLNEILDLLASPPLAAAAGLDAAAFERLHGW
LQAAGARWGLDAPHRGQHQAPADDACTWQFALDRLLLGHASGSDDDLAGVAPWPELEGSA
LAALDALIRLLRVLARHQKTLAEALPPAQWRERLLGLLAALLPDAPAEPSTQRALERLRK
LVDEFAGEAARAGFEAPVPAEVVRAHFSAVLSEADTRAPLLTGGVSFGRMVPMRLLPFRA
ICVLGLNDGDFPRRDPAAGLSRLTAELGTARRRHGDRSLREDDRFLFLQLLASAQDVFYL
SYLGADARDGSVREPSVLVSELIDAVAACHADPAAARQAMVVRHPLQPFAPAAFGGDGEP
RRFSYRRQWHPAAGAVGGQRGQLAPWSAGVLDAPLPAALREPGVSLDALRRFLADPAGQF
LEQRLGLRLGGEIEASDDVEPLVLPERGREHGTLQQQVLAALLEGREQGLYERLRARALL
PSGALGRQQFEQLLGRIRPCADSFAQWYDGTPLQSQRLEVAIDDSIVHGRVAQIHPQGLP
RLQAGAPGVAWVLRSGLDWLLANAAGVPLSLLQFIDAGDGGFGPHVLPPPPAEQARSALK
ALLQLRWQGLQAPLPFAPYTGWAIYNADPDAREKTAREKWHGSERSWGERDGEALQLALR
GADPFADPATTNRFIHNSLLVFTALREARVPAGSEDRA
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcctccgcggacttccgcctctaccactccaacgccctggacgtgcttgcc
tcgctgctcgcccatgcgctgcgcgagcccgatcccggccggccgctgctggcggccgac
acggtgctgatcccgcaggtggcgatgcgccgctggctgcagtccacgctggccgccgag
tacggcatcgccgccaacctcgagttcctcacgcccggcgagttcgtcgcccgcgcgctg
aaggaaaacgtgccgggcgagcaggacgacctgggcgcggccgggctgcactggcggctg
tacgcggcgctgaccgacgcggcgctgatgcggcagccggcaatggccgcgctgcgcgcc
tacctggccggcaatgcgcccggcggcgacgacccgttgcgggcctggtcgctggctgcc
gaactgggcggggtgttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgg
gaggccggcgccgacgccgccgacccgcaggccatcctgtggcgccatatcgccgctggc
cagcagcaccgcgcgcgccgcatcaacgactacctggcgcggttcgagggcgccggccag
ccgctgccgcgcggcctgccgtcgcggctgttcgcattcgccacgctcaacgtctcgccc
gacgtactgcgggtgatcgccacccaggcgcgggtcggtacgctgcatttctacctgccc
acgcccacgcgtgcctactggggcgacctgcagaccctggccgagcggctgcgcggcggc
atcgacgacccgttcggcagcgccgccggcgagaacccgctgctgcaggcctggggcgcg
gccgggcgcgacttcatggcggtgctgggcagttacgaggtggtgcacccatccggcgaa
atcgccgcctatgccgatccggagcgccgcgaggggccgacgctggaccagggcgggctg
agcgacagcctgctgcatcgcctgcaggccgacctgttccaccgccgcgcgcggccgccg
gcgccactgcgcccggcattgcgggtggacgatcccagcgtgcaggtccacgcctgccat
acccgcctgcgcgaaatgcaggtactgcacgaccagctgcgcgcgctgctggacgatccg
cgcttcgacccgccgctgcagccgcgcgagatcgcggtgctggcgccggacatcgacccc
tacgtgccgtacctggaatcggtgttcggtggccgcggtggcggcgagggccatatcccg
tgggcgctggccgatgccagtccgctgcagggcgagccgctggccgaggtgttcgtgcag
ctgctggggctgccggtctcgcgcttcggcctcaacgagatcctcgacctgctcgccagc
ccaccgctggccgctgccgccggactggatgcggccgcgttcgagcgcctgcacggctgg
ctgcaggccgcaggcgcgcgctgggggctggatgcgccgcatcgcggccagcaccaggcg
ccggccgacgacgcctgcacctggcagttcgcgctggaccggctgctgctgggccacgcc
agcggcagcgatgacgacctggccggggtcgcgccgtggccggagctggagggcagcgca
ctggccgcgctcgatgcgctgatccgcctgctgcgggtgctcgcccgccaccagaagacg
ctggccgaggcgctgcctccggcgcagtggcgcgagcgcctgctcgggctgctggccgcg
ctgctgccggacgccccggccgagccgtccacccagcgcgcgctcgaacgcctgcgcaag
ctggtggacgagttcgccggcgaagccgcccgcgccggcttcgaggccccggtgccggcc
gaagtggtgcgcgcgcatttttccgcggtgctgtccgaggccgacacccgcgcgccgttg
ctcaccggcggcgtcagcttcggccgcatggtgccgatgcggctgctgccgttccgcgcg
atctgcgtgctgggcctgaacgacggcgatttcccgcgccgcgacccggccgccggcctg
agccggctcaccgccgaactcggcaccgcgcgtcgccgtcatggcgaccgctcgctgcgc
gaggacgaccgtttcctgttcctgcagctgctggcctcggcgcaggacgtgttctacctg
agctacctcggtgccgacgcgcgcgacggcagcgtgcgcgagccctcggtgctggtcagc
gagctgatcgatgcggtggccgcctgccacgccgatccggcggccgcgcgccaggccatg
gtcgtgcgccatccgctgcaacccttcgccccggccgcgttcggtggcgatggcgagccg
cggcgtttcagctaccgccgccaatggcacccggccgccggcgcggtcggtggccagcgc
gggcagttggcgccgtggtcggccggcgtgctggatgcgccgctgcccgctgccctgcgc
gagcccggcgtgtcgctggatgcgctgcgccgtttcctggccgatccggccgggcagttc
ctcgaacagcgcctgggcctgcgcctggggggcgagatcgaggccagcgacgatgtcgaa
ccgctggtgctgcccgaacgcgggcgcgagcacggcacgctgcagcagcaggtgctcgcc
gcgctgctggagggccgcgagcaggggctgtacgaacgcctgcgcgcgcgcgcgctgctg
ccgtccggagcgctcggccggcaacagttcgaacagctgctgggccgcatccgcccgtgc
gcggacagcttcgcgcagtggtacgacggcacgccgctgcagtcgcagcggctggaagtg
gcgatcgacgacagcatcgttcacggccgcgtcgcacagattcatccacagggactgcca
cgcctgcaggccggtgcgccgggcgtggcctgggtgctgcgcagcggcctggactggctg
ctggccaatgccgccggggtgccgctgtccctgctgcagttcattgatgccggcgatggc
ggtttcggtccgcacgtcctgccgccgccacccgctgaacaggccaggtcggcgctgaaa
gccttgctgcagttgcgctggcaggggctgcaggcgccgctgccgtttgccccgtacacc
ggctgggcgatctacaacgccgatccggacgcacgcgaaaagaccgcgcgcgagaagtgg
catggcagcgagcgcagctggggcgagcgcgatggcgaagccctgcagctggcgctgcgc
ggcgccgatccgttcgccgatccagccactaccaacagatttatccacaacagcctgctg
gtgttcaccgcactgcgcgaggcccgggtgccggccggcagcgaggaccgcgcatga
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