Staphylococcus aureus subsp. aureus ED98: SAAV_1249
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Entry
SAAV_1249 CDS
T01124
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sad
Staphylococcus aureus subsp. aureus ED98
Pathway
sad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAAV_1249 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sad03019
]
SAAV_1249 (pnp)
03016 Transfer RNA biogenesis [BR:
sad03016
]
SAAV_1249 (pnp)
Enzymes [BR:
sad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAAV_1249 (pnp)
Messenger RNA biogenesis [BR:
sad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAAV_1249 (pnp)
Transfer RNA biogenesis [BR:
sad03016
]
Prokaryotic type
tRNA degradation factors
SAAV_1249 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
TRAM
SPATA25
DUF3921
KH_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ACY11154
LinkDB
All DBs
Position
1279207..1281303
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AA seq
698 aa
AA seq
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MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDDATLTARLIDRPIRPLFPKGYKHDVQIMNMVLSA
DPDCSPQMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGKYIINPTVEEKEVSRLDLEVA
GHKDAVNMVEAGASEITEQEMLEAIFFGHEEIQRLVDFQQQIVDHIQPVKQEFIPAERDE
ALVERVKSLTEEKGLKETVLTFDKQQRDENLDNLKEEIVNEFIDEEDPENELLIKEVYAI
LNELVKEEVRRLIADEKIRPDGRKPDEIRPLDSEVGILPRTHGSGLFTRGQTQALSVLTL
GALGDYQLIDGLGPEEEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALKYIIP
DTADFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREIIEEALEQARRGRLEIMNH
MLQTIDQPRTELSAYAPKVVTMTIKPDKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQAMINRAREIIEEITREAEVGQTYQATVKRIEKYGAFVGLFPGKDALLHISQISK
NRIEKVEDVLKIGDTIEVKITEIDKQGRVNASHRALEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtttttaaaactgaatgggcaggaagatctttaacgattgaa
acagggcaattagctaaacaagcaaatggcgctgtattggttcgttatggagatacagtc
gtgttatcgacggcaactgcatcaaaagaacctcgtgatggagatttcttcccattaaca
gtgaactacgaagaaaaaatgtacgctgcgggtaaaattcctggtggatttaaaaagaga
gaaggacgtcctggtgacgatgcaacattaactgcgcgattaattgatagaccaattaga
cctttattccctaaagggtataagcatgatgttcaaattatgaacatggtattaagtgca
gatcctgattgttcaccacaaatggctgcaatgattggttcatctatggcgcttagtgtg
tcggatattccattccaagggccaatcgccggtgtaaatgtgggttatattgatggtaaa
tatatcattaacccaacagtagaagaaaaagaagtttctcgtttagaccttgaagtagct
ggtcataaagatgcagtaaacatggtagaggcaggcgctagtgagattactgaacaagaa
atgttagaggcgattttctttggtcatgaagagattcaacgtttagttgatttccaacaa
caaatcgtcgaccacattcaacctgttaaacaagaatttattccagcagagcgtgatgaa
gcgctagttgaacgtgtgaaatctttaaccgaagaaaagggacttaaagaaacagtttta
acatttgataaacaacaacgagatgaaaatcttgataacttaaaagaagaaatcgtcaat
gaatttatcgatgaagaagatccagagaatgaattacttattaaagaagtttatgcaatt
ttaaatgaattagtgaaagaagaagttcgacgtttaattgcagatgaaaaaattagacca
gacggccgtaaacctgatgaaatccgtccattagattctgaagttggtattttacctaga
acgcatggttcaggtctatttacacgtggtcagactcaagcactttcagttttaacatta
ggtgctttaggcgattatcaattaattgatggtttaggacctgaagaagaaaaaagattc
atgcatcattataacttcccgaacttttcagtaggtgaaactggtccagtacgtgcgcca
ggtcgtcgtgaaattggacatggtgcgttaggtgaaagagcattaaaatatattattcct
gatactgctgatttcccatatacaattcgtattgtaagtgaggtacttgaatcaaacggt
tcatcatctcaagcgtcaatttgtggatcaaccttagcattaatggatgcgggcgtaccg
attaaagcaccagttgctggtattgctatgggccttgttacacgtgaagatagctatacg
attttaactgatatccaaggtatggaagatgcattaggtgatatggactttaaagtcgct
ggtactaaagaaggtattacagcaatccaaatggatattaaaattgacggtttaacgcgt
gaaattatcgaagaggctctagaacaagcgagacgtggtcgtttagaaataatgaatcat
atgttacaaacaattgatcaaccacgtactgaattaagtgcttacgcgccaaaagttgta
actatgacaattaaaccagataagattagagatgttatcggacctggtggtaaaaaaatt
aacgaaattattgatgaaacaggcgttaaattagatattgaacaagatggtactatcttt
attggggccgttgatcaagctatgataaatcgtgctcgtgaaatcattgaggaaattaca
cgtgaagcggaagtaggtcaaacttatcaagccactgttaaacgtattgaaaaatacggt
gcgtttgtaggcctattcccgggtaaagatgcgttgcttcacatttcacaaatttcaaaa
aatagaattgaaaaagtggaagatgttttaaaaatcggtgacacaattgaagttaagatt
actgaaattgataaacaaggtcgagtaaatgcatcacacagagcattagaagaataa
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