Staphylococcus aureus subsp. aureus ED98: SAAV_1250
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Entry
SAAV_1250 CDS
T01124
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sad
Staphylococcus aureus subsp. aureus ED98
Pathway
sad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAAV_1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sad03019
]
SAAV_1250
Messenger RNA biogenesis [BR:
sad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAAV_1250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
ACY11155
LinkDB
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Position
1281641..1283212
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AA seq
523 aa
AA seq
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MFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDA
PVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCI
HTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVI
EHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGY
FDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAI
TASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGE
FKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGN
IVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIV
EAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgttagatgctggacttatgtttccagaagacgaaatgctaggtattgatatt
gttataccagacatttcatacgtacttgaaaataaagataaattgaagggtatattcctt
acacacggacatgagcacgcgattggtgcagtgagttatgttttagaacaattagatgca
ccagtatatggatctaaattgacaatagcgttaattaaagaaaatatgaaagcccgtaat
attgataaaaaagttcgctactacacagttaacaatgattcaattatgagattcaaaaac
gtgaatattagtttctttaatacgacacacagtattcctgatagtttaggtgtttgtatt
cacacttcatatggtgccattgtgtatacaggtgaatttaagtttgaccaaagtttacat
ggacattatgcaccagatattaaacgtatggcagagattggtgaagaaggcgtatttgtc
ttaatcagtgattctactgaggcagagaaacctggatataatactccggaaaatgtaatt
gaacatcatatgtatgatgcttttgcaaaagtgcgaggtcgcttgattgtttcatgttat
gcttcgaactttatacgtattcagcaagttttaaatattgctagcaagctaaatcgtaaa
gtgtcatttttaggaagatcacttgaaagttcatttaatattgctcgtaaaatggggtat
ttcgacattcctaaagatttgctaattcctataacagaagttgataattatcctaaaaat
gaagtgataattatagctactggtatgcaaggagaacctgtagaagccttaagtcaaatg
gcgcaacataagcataaaattatgaatatcgaagaaggcgattctgtatttttagcaatt
acggcttctgctaatatggaagttatcattgcgaatacattaaatgagcttgtacgtgct
ggcgcacatattattccaaataacaagaagattcatgcttcaagtcatggttgcatggaa
gaattaaaaatgatgattaatattatgaaacctgaatactttattcctgtacaaggtgaa
tttaaaatgcagatagcacatgcgaagctagcagctgaagcaggtgttgcaccggaaaag
attttccttgtggaaaaaggagatgtcattaattacaacggtaaagatatgatattaaat
gaaaaggtaaattcgggaaatattttaatagatggtattggtattggggatgtaggaaat
atcgtgttgagagaccgtcatcttttagcagaagatggtatctttattgctgtagtaacg
ttagatcctaaaaatagacgtatagctgcgggtcctgaaattcaatctcgtgggtttgta
tatgtacgtgaaagtgaagacttattacgtgaagcagaagagaaagtacgtgaaatagta
gaagctggtttacaagaaaaacgcatagaatggtctgaaattaagcaaaatatgcgtgat
caaattagtaaactattattcgaaagtacaaaacgtcgtcctatgattattccagtaatt
tctgaaatttaa
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