Staphylococcus aureus subsp. aureus ED98: SAAV_1861
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Entry
SAAV_1861 CDS
T01124
Symbol
cbf1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sad
Staphylococcus aureus subsp. aureus ED98
Brite
KEGG Orthology (KO) [BR:
sad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sad03019
]
SAAV_1861 (cbf1)
Messenger RNA biogenesis [BR:
sad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAAV_1861 (cbf1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ACY11742
LinkDB
All DBs
Position
complement(1916406..1917347)
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AA seq
313 aa
AA seq
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MRNIENLNPGDSVDHFFLVHKATQGVTAQGKDYMTLHLQDKSGEIEAKFWTATKNDMATI
KPEEIVHVKGDIINYRGNKQMKVNQIRLATTEDQLKTEQFVDGAPLSPAEIQEEISHYLL
DIENANLQRITRHLLKKYQERFYTYPAASSHHHNFASGLSYHVLTMLRIAKSICDIYPLL
NKSLLYSGIILHDIGKVRELSGPVATSYTVEGNLLGHISIASDEVVEAARELNIEGEEIM
LLRHMILSHHGKLEYGSPKLPYLKEAEILCYIDNIDARMNMFEKAYKKTDKGQFTDKIFG
LENRRFYNPESLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatagagaatctaaatcccggagattcagttgatcactttttcttagtgcat
aaagctacacagggtgtaacagcacaaggtaaagattatatgacattacatttgcaagat
aaaagtggtgaaattgaagcgaaattttggacggctacaaaaaatgatatggcaacaatc
aagcctgaagaaattgtacatgttaaaggtgacatcataaactatcgcggaaataaacag
atgaaagtcaaccaaattagactagcgacaactgaagatcaattaaaaacagaacaattt
gtagatggtgcacctttatcaccggcagaaatacaagaagagatttctcattatttgcta
gatattgaaaatgctaatttacaacgtatcacacgtcatttattgaaaaaatatcaagaa
cgattttacacatatccagctgctagttctcatcatcataactttgcgagtggcttaagc
tatcatgtattgacgatgttacgtattgcaaaatcaatttgtgacatttatccattgtta
aacaaaagtttgttatatagtggtattattttgcatgatattggtaaagttagagaattg
agtggtcctgttgcgacgtcgtatacagtcgaaggtaacttattaggacacatctcgatt
gcgagtgatgaagtagttgaagcagctcgtgaattgaacattgaaggagaagaaatcatg
ttgttaagacatatgattttatctcatcatggtaagttagagtatggttcgccaaaactg
ccatacttaaaagaagcagaaattttatgctatatcgataacatcgatgctagaatgaat
atgtttgaaaaggcttataaaaaaactgacaagggtcagtttacagataaaatatttggt
cttgaaaatcgtagattctacaatcctgaatcactcgattaa
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