Staphylococcus aureus subsp. aureus ED98: SAAV_2117
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Entry
SAAV_2117 CDS
T01124
Symbol
rpoF
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sad
Staphylococcus aureus subsp. aureus ED98
Brite
KEGG Orthology (KO) [BR:
sad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sad03021
]
SAAV_2117 (rpoF)
Transcription machinery [BR:
sad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAAV_2117 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
GerE
HTH_16
HTH_Tnp_1
HTH_38
HTH_3
KORA
HTH_28
HTH_23
IF2_N
DUF6761
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ACY11962
LinkDB
All DBs
Position
complement(2142407..2143177)
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AA seq
256 aa
AA seq
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MAKESKSANEVSPEQINQWIKEHQENKNTDAQDKLVKHYQKLIESLAYKYSKGQSHHEDL
VQVGMVGLIGAINRFDMSFERKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPRIK
KVSDELTAELERSPSISEIANRLEVSEEEVLEAMEMGQSYNALSVDHSIEADKDGSTVTL
LDIMGQQDDHYDLTEKRMILEKILPILSDREREIIQCTFIEGLSQKETGERIGLSQMHVS
RLQRTAIKKLQEAAHK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagtcgaaatcagctaatgaagtttcacctgagcaaattaaccaatggatt
aaagaacaccaagaaaataagaatacagatgcacaggataagttagttaaacattaccaa
aaactaattgagtcattggcatataaatattctaaaggacaatcacatcacgaagattta
gttcaagttggtatggttggtttaataggtgccataaatagattcgatatgtcctttgaa
cggaagtttgaagcctttttagtacctactgtaatcggtgaaatcaaaagatatctacga
gataaaacttggagtgtacatgttccgagacgtattaaagaaattgggccaagaatcaaa
aaagtgagcgatgaactaaccgctgaattagagcgttcaccttctatcagtgaaatagct
aatcgattagaagtctcagaagaagaagtgttagaagcaatggaaatgggacaaagttat
aatgcgttaagtgttgatcattccattgaagctgataaagatggttcaactgttacgcta
ttagatattatggggcaacaagatgaccattatgacttaactgaaaaacgtatgatttta
gaaaaaatattacctatattatctgatcgcgaacgagaaatcatacaatgtacgtttatt
gaaggattgagtcaaaaagagacaggtgagcgtatcggtttaagtcaaatgcatgtatca
cgacttcagagaacggcaattaagaaattacaagaagcagcacataaatag
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