Candidatus Steffania adelgidicola: GFK82_00118
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Entry
GFK82_00118 CDS
T07600
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sade
Candidatus Steffania adelgidicola
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sade03016
]
GFK82_00118 (trmA)
Enzymes [BR:
sade01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
GFK82_00118 (trmA)
Transfer RNA biogenesis [BR:
sade03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GFK82_00118 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_15
Methyltransf_31
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
Methyltransf_4
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UDG79604
LinkDB
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Position
complement(203768..204880)
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AA seq
370 aa
AA seq
DB search
MTPIRLSLDKYEQQLAEKIHHLRQKTRAFQAPDAQIFRSKPAHYRTRAEFRIWHDQDDLY
HLMFDQKTKKLIRIDYFMAGSMLINALMSELLDVIRLEPILRTKLFQIDYLTTQNNQALI
SLIYHRPLYDPWYNYAVNLRNTLRDRGYNIQLIGRAKKSKICLNCDYVDEYIPIAGRMLI
YRQIENSFTQPNFDINIHMLEWALAATKDANGDLLELYCGNGNFSLAMAHNFNGVLATEI
DKLSVQAAQHNIAANHVSNVKVVRMSTEEFTQAMQGERKFIRLKNINLQQYRFETIFVNP
PRRGLDNRTIGMVQTYPRIVYISCNLESLCQNLIILSKTHTIEKLALFDQFPYTPHIECG
VLLVRKMTAV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctataaggttatctttagacaagtatgagcaacagttagcggaaaaaatacac
catcttcgtcaaaaaacgcgagcattccaggctcctgatgcacagatattccgctcaaag
cctgcacattatcgcacacgagccgaattccgcatttggcacgatcaggatgatctctat
catctcatgttcgatcagaagaccaaaaaattaattcgcatcgattattttatggcaggc
agcatgctcattaacgcactcatgagcgaactactcgacgtcatacgtttagaacctata
ctgcgcactaaactatttcaaatagactaccttacaacgcagaacaatcaggcactaatt
tcgcttatttatcaccgcccactatacgatccctggtataattacgctgtgaacctgcgt
aatacgttacgtgaccgtggatataacattcaactaattgggcgtgctaaaaaaagcaag
atctgccttaattgcgattatgtcgatgaatatattccaatcgccggacgcatgcttatc
taccgacagattgaaaatagctttactcaacctaattttgatataaatattcatatgctt
gaatgggcattagctgctacaaaagatgctaatggtgatctattagagctttattgcgga
aatggcaatttttctctagcaatggcccataattttaatggagtgctggctactgaaata
gataaactatcagtgcaagctgcacagcataacattgctgcgaatcatgttagcaatgtt
aaagtagttcgcatgtctacggaagaatttactcaggcaatgcaaggagaacgcaagttc
attcgtctaaaaaatattaatttacagcagtatcgttttgaaacaattttcgtcaatcca
ccacgaagaggactcgacaatagaacgataggtatggtacagacatatccgagaatcgtg
tatatctcttgcaatcttgaatccctctgccaaaacctgatcatcttgtcaaaaacacat
actatcgagaaactagcgttatttgatcaattcccctacacaccgcatatagaatgtggt
gtgttacttgtgcgtaagatgacagcggtgtaa
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