Candidatus Steffania adelgidicola: GFK82_00259
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Entry
GFK82_00259 CDS
T07600
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sade
Candidatus Steffania adelgidicola
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sade03009
]
GFK82_00259 (rluC)
Enzymes [BR:
sade01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
GFK82_00259 (rluC)
Ribosome biogenesis [BR:
sade03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GFK82_00259 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
UDG79730
LinkDB
All DBs
Position
458871..459857
Genome browser
AA seq
328 aa
AA seq
DB search
MVSIYLQSHFMNANKPSGYFITISLDAAGQRTDNFLRTHLKGVPKSMIYRIIRKGLVQVN
KKKVKPEYKLKHDDKVRIPPVRRSEVEKSCIFTTLDNVAILNDAVLYEDEDLLILNKPAG
TAVHGGSGLSFGVIEGLRVLRPDVRFLELVHRLDRDTSGVLLIAKKRSALCSLHEQFRTK
GIKKDYLALVKGYWKSRSQKVVAPLLKNALTSGERIVRVNAEGKPSETRFKVEERFALAT
LIRATPVTGRTHQIRVHAQYAGHPIAFDNRYGDDAFNQTLKVCALNRLFLHAISLCFEHP
TSRKTFRIEAPLDIKLNRCLLYLRANKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgatatatttacaatctcattttatgaatgcgaataaacctagtggttatttt
atcaccatttctctagatgcagctggtcagcggactgataattttttgcgtactcacctt
aaaggggtgccgaaaagtatgatttaccgaattattcgaaaaggtttggttcaagttaac
aaaaaaaaagtcaaaccggaatataaacttaaacatgatgataaagtgcgtattcctcca
gtacggcgatcagaggtagagaagtcatgtatttttactacattagataatgtggcgata
ttaaatgatgctgtgctctatgaagatgaggatcttctgatcctgaataagccagctggt
acagctgtgcatggtggaagcggtctcagttttggcgtcattgaaggcttgcgagtactt
cgtcccgatgtacgttttctcgagctagttcaccgcctagatcgagatacctctggggtc
ttgttgatagccaagaagcgttcggcattgtgttctctgcatgagcaatttcgtactaaa
gggataaaaaaagattatttagcgctagtaaaaggttattggaaatcccgttctcaaaag
gtagtggcaccgctactaaagaatgcgctcactagtggtgagcgcatcgtgcgggttaat
gctgagggtaagccgtcagaaacccgtttcaaagtggaagaacgatttgcgttagcaaca
cttattcgagccactccggttactggtcgcacgcatcagattcgggttcatgcccaatat
gctggtcatcctattgcgtttgataatcgttacggggatgatgcgtttaatcagacacta
aaagtgtgtgccctaaatcgtctttttctacacgccatttcgctgtgttttgagcatccg
actagcagaaaaacatttcggatagaagctccattagatataaagttaaatcggtgcctt
ctttatcttcgtgccaacaagaagtaa
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