Candidatus Steffania adelgidicola: GFK82_00340
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Entry
GFK82_00340 CDS
T07600
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sade
Candidatus Steffania adelgidicola
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sade03016
]
GFK82_00340 (truB)
Enzymes [BR:
sade01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GFK82_00340 (truB)
Transfer RNA biogenesis [BR:
sade03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GFK82_00340 (truB)
Prokaryotic type
GFK82_00340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UDG79802
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All DBs
Position
553971..554912
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AA seq
313 aa
AA seq
DB search
MGRPRCRGRDINGIVLLDKPIGLSSNELLQKVKRLFRANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYRVTARLGKRTDTADAFGKTISLRPVFLDKAKLEAALSQFLGESW
QVPSMFSALKYQGCPLYEYARKGIMVARKERRIYVYDLKLHYWDLTQVELEIHCSKGTYI
RTIIDDLGERLHCGAHVIALRRLAVSQYPTEAMVTFEALQAIALGAPEASATLTQLDSLL
LSVDSALTNMPVVHLPSDIAERIRFGQTVLLTVYQKAALVRIIAGDSRQFLGIGEIVMPG
RLIPRRLMAESPA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggacggccaaggtgtcgtggtcgtgatattaatggtatcgttcttctggataaaccg
atcgggctgtcttccaatgaacttcttcaaaaagttaagcgcttgtttcgcgctaataag
gctggacacaccggtgcattagatcctctagcgaccggtatgctccctatttgccttggt
gaggcaactaaattttcccagtatttgctagatgccgataagcgttatcgggtcactgcc
aggcttggtaagcgtaccgataccgctgatgctttcggaaagacgattagcctacgcccg
gtatttctagataaagcgaaattagaagcagcgttatctcagttccttggtgaaagttgg
caagttccatcgatgttttccgcgctgaaatatcagggatgtccattatatgaatatgcc
cgaaaaggcatcatggtggcgcgcaaggaacggcgaatttacgtgtatgatttgaagtta
cattactgggatctgactcaggttgaattagaaattcattgttctaaaggtacttacatt
cgtactattatcgatgatttaggtgaacgtctccactgtggcgcccatgttatagcgtta
cgccgtttagctgtttcacagtatcctactgaagctatggtaacctttgaggcgttacag
gccatagctcttggcgcgcctgaggcgtcagcaactctaactcagttagattcactgttg
ttatcggtagatagcgcgcttacgaatatgccagtagtacatcttccatctgatattgca
gaacggatacggtttgggcaaaccgtattacttactgtttaccaaaaagctgctctggta
cgtattatcgcaggagattctaggcaatttctcggtattggtgaaattgtaatgcctggc
cgattaattccgcgccgcttgatggcagaatcgcctgcttga
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