Candidatus Steffania adelgidicola: GFK82_00374
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Entry
GFK82_00374 CDS
T07600
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFK82_00374 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00374 (recC)
Enzymes [BR:
sade01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GFK82_00374 (recC)
DNA repair and recombination proteins [BR:
sade03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFK82_00374 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UDG79835
LinkDB
All DBs
Position
complement(619958..623317)
Genome browser
AA seq
1119 aa
AA seq
DB search
MFTVYHSNQLEQLLTLNARIILEQPLHDPFQPEIILVQSTDMARWIQMELAKHLGIAINI
ECLRPADFISKMFTRVLPELPQKSIFSKSLITWFLLRLCQMPDCETVSVYLRHDHDKHKT
FKFVTQIANLFEKYLLYRPDWLERWERGELIQGIGEAQRWQAPLWCALVAETKRIGKRIW
DNPNLYQRFIQTLTQSKICLAGLPNRVFIYDISAISPSQFDTLIALGHHIDIHLLFRNPC
RYYWGDIRDPAVPAQLPQHRQSYFQEQPEDRLFRSQSKACAFINKKMEQKIDNPLLVSWG
KKGLDTLYLLTQTDSIAQVDAFIEPTGNSLLSILKRDILRLEDHTLINMSANRVSGNKRQ
RLLQANDRSLSIHVCHSPQRELEVLHDSLLAMIEEDSTIEPHNVIVMVADIDRYAAAIQS
VFSKAGREQYLPFTISDSRVRSIHPVVLTVLNLLELPQSRFSAEQVLALLEVPALSARFK
INETELHILRKWVAESGIRWGLDDDTFRKLMLPATGQNTWQFGLTRMLLGYAMESKSGDW
QGIVPYDESSGLIANLVGQLGELLKQLRQWQDWLAQPRSLDSWGPCARKMIEDFFLPDPE
AESALALMENYWQQILRSGIQTGYNQPVPVRLLREQLAQKLDQNRVNHRFLSGGINFCTL
LPMRLIPYRIICLLGMNDGVYPRTPMVEGFDLMAQQPRHGDQSDRYGERYLFLELLLCAQ
EKLYISFIGNTLQDNTSRYPSILISELSDYITHSFYLLDDMHLNVENNTEQIRAHLWQWH
SRMPFMPENFLPDSKFQSFANEWLPAARNEGKPESPFITPLKPLDFNTISLDELMRFYRH
PIRAWFVQRLGISFQQTSIELLGEEPFILDNLTRYQLNNRLLNVMINEESTEKLFRQVRG
AGLLPYGAFGELYWLKESKKLAPLAQQVRAWRLLDTQDLDIHIKLDNILLSGLLPKVQEN
GLLRWRPGTLSARDGILLWLEHLVYCAMGGKGESRIVGMRGAWHFAPLPSCQAKDFLVFL
INGYSQGMTSPLLLLPRSGGAWLTHCYNKVTQSVNKEEIRQLEAHDKLIQAWQGNKYYPG
EIEDPYLNRVLHPLDKKQIKAIILAAKHYFLPFFKCNLF
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtttatcattcaaatcagctggaacagctactgacgctaaatgcaaggata
atcttagaacagcccctacacgatccgttccagcctgaaattatcctggtgcaaagcact
gatatggcccgatggatacaaatggaattagctaaacatcttggtatagctatcaatata
gaatgtttacgcccagctgactttatctctaaaatgtttactcgtgtcctaccggaactt
cctcaaaaaagtatattttctaaatcgttgataacttggtttctacttcgcctttgccag
atgccggattgcgagacagtaagcgtatatctgcgtcatgatcatgataaacataaaact
ttcaagtttgttacccagatagcaaatctattcgaaaagtatctactataccgtcctgat
tggttggaacgctgggaacgcggcgagttaattcaaggaataggtgaagcgcagcgatgg
caggcaccgctttggtgtgctttagtagctgaaacaaaacgaatagggaaacggatatgg
gataaccctaatctctatcagagatttattcagactctaacgcaaagcaaaatttgccta
gcgggattaccgaatagagttttcatatacgatatctctgccatatctcctagtcagttt
gacacattgatagcgctaggtcaccatattgatatccatctactcttcaggaatccctgc
cgctattactggggagatatccgggatcctgctgttcctgcgcaattgccacagcaccgc
cagagttattttcaagaacagccagaggataggctgttccggagtcaatcaaaagcttgc
gcattcattaataaaaagatggaacagaaaatagacaacccactcttagtctcctggggc
aagaaaggacttgatactctctacttactgacccagacagacagcattgctcaggtggat
gcatttattgagccaacaggtaattctctcttaagtatactaaagcgcgatatcttaaga
ctagaagatcacactctaataaacatgagtgctaatagagtgtccggaaataagagacag
cgactactccaagcgaatgatcgttcgctcagcatacatgtgtgccatagtcctcagagg
gaattggaagtactgcatgatagtctgttagcaatgattgaggaagattccacgattgag
ccacataacgtgatcgttatggtagcggatatcgaccgctacgcggcagcaattcaatca
gtatttagtaaagctggcagagaacaatatcttccttttactatttccgacagtcgggta
cggtcaatccaccctgttgtgcttaccgttcttaacctactcgaattaccccagagtcga
ttttcggctgaacaggttctagcgttactcgaggtaccagcattatcggctcgctttaaa
attaatgagacagagctccacatactacgcaaatgggtagcagagtctggcattcgatgg
gggttagacgacgatacatttcgtaaactgatgttacctgctactggtcagaatacgtgg
caatttggtttaactcgaatgctactaggctatgcaatggaaagtaagagtggggattgg
cagggtattgtgccttacgacgaatccagtggcttgatagcaaatctagttggtcaacta
ggggagctgttaaaacagcttcgtcaatggcaagactggcttgcacaaccgcgctcttta
gattcctggggtccttgcgctagaaaaatgatagaggatttcttcttacctgaccctgaa
gctgaatcggcgcttgcattgatggagaattattggcagcagatcttacgatccggtata
caaacgggatacaatcagccggtaccagtgagactacttcgagaacaactagctcaaaag
ctagatcagaatcgagttaatcatcgatttctaagcggtggtataaatttctgtacccta
ctaccgatgcgcttgattccataccgtattatctgcctactaggcatgaatgatggtgtt
tatccgagaacaccaatggtagaagggtttgacctgatggcgcagcaacctagacatggt
gaccaaagcgatcgttatggtgagcgctatctgtttctagagcttctcctgtgtgcacag
gagaaactgtatattagttttatcggcaatactcttcaagataatacctcacgctatccc
tcgatactcataagtgagctcagtgattatatcacacatagtttttatctacttgatgac
atgcacctgaatgttgagaacaataccgagcagatacgtgcacatctgtggcaatggcac
agtcgaatgcctttcatgccagaaaattttctacccgatagcaagttccaaagcttcgct
aacgaatggctaccagccgccagaaatgaaggcaagccagagtcgccttttatcaccccg
ttaaaaccgctggacttcaacactatcagtttagatgaattgatgcgattttatcgacat
ccgatccgtgcgtggtttgtacagcgtctagggatctcctttcagcagacctcaattgag
ctgctcggggaagaaccttttatcttagataatctgactcgatatcaacttaacaaccgg
ttgctaaacgtaatgatcaacgaggaaagtactgaaaaactgtttcgccaagtccgtggc
gccggcttgttaccctatggcgcgtttggtgaactatattggcttaaagaatctaaaaag
ctggcaccgcttgctcagcaagtaagagcgtggcgactcttagatacacaggatcttgat
attcatatcaaactagacaatatattgctttctggtttgctgccaaaggtacaggaaaac
ggattattacggtggcgacctggcactctatctgctcgagacggcatactgttgtggttg
gaacatctagtctattgcgctatggggggaaaaggagagagtcggatagtcggtatgcgc
ggagcatggcatttcgcacccctgcctagctgccaggcaaaagattttttagttttcctg
attaacggatactctcagggtatgacgtcacctcttttacttttacctcggtcgggagga
gcatggctaacccactgttacaataaagtaacacagagcgttaacaaagaggaaatccga
caactggaggcacatgacaaactgatacaagcctggcaggggaataagtattatcctggc
gaaatcgaagatccttatttgaatcgagtacttcatccgttagataaaaaacaaattaag
gcgattatcttagctgcgaaacactattttctaccattctttaaatgtaatttgttttaa
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