Candidatus Steffania adelgidicola: GFK82_00384
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Entry
GFK82_00384 CDS
T07600
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03030
DNA replication
sade03410
Base excision repair
sade03420
Nucleotide excision repair
sade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFK82_00384 (polA)
03410 Base excision repair
GFK82_00384 (polA)
03420 Nucleotide excision repair
GFK82_00384 (polA)
03440 Homologous recombination
GFK82_00384 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sade03032
]
GFK82_00384 (polA)
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00384 (polA)
Enzymes [BR:
sade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFK82_00384 (polA)
DNA replication proteins [BR:
sade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GFK82_00384 (polA)
DNA repair and recombination proteins [BR:
sade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GFK82_00384 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFK82_00384 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UDG79845
LinkDB
All DBs
Position
complement(636887..639676)
Genome browser
AA seq
929 aa
AA seq
DB search
MVKITNNPLILVDGSSYLYRAYYAYPLLKNSIGEPTGAIYGVLNMLKSILKQYKPSHVAV
VFDAKGKTFRDQLFKKYKSHRPSMPKDLSDQIIPIYHMVKAMGLTQLSINGVEADDVIGT
LALEAARNGRNVLISSSDKDMAQLVSSKITIINTMSNTILGPEEVKLKFGVPPALIIDYL
ALIGDNADNIPGVIGIGEKSAKVLLREIGGVAALYQQLDKVSTLNLRGAKTIAAKLEKHR
EVAFLSYQLATIKTDVPLDVSYDHLIVKAPMVQTLTLSFQRYEFQRWLNDLKIGKWLEKG
KISGVSPGLFIRHRPIAVEGTMQVFLKDDYQIIDNMIMLNKWITTIRNAGAFAFNTKTDG
LDTLTANLLGLCFSVKPGKAAYLPVGHNYLNTPNQLNWNAVLALLKPVFQDSGIAKISQN
LKFECGILKRHGIEITGITFDIMLESYVLNSVAGHHDKTSLAHRFLAHSGIDFEKIDSKG
YHQMPFDQMTMEQVALYAAEETNVTLRLHQQLWPRIKESPELKKIFEEVEIPLVPVLSRI
ERSGVLIDESMLVSHSLELVQRLKKLEEEAHQLAQEPFNLSSTKQIQIILYDKQQISVLK
KTPGGAPSTNEEVLTALAVNYPLPKLILEYRSLAKLKSTYIDKLPKMINPLSKRVHTSYH
QSVTATGRLSSSDPNLQNIPVRNNEGRRIRKAFIAPPGALIVAADYSQIELRIMAHLSQD
PGLLHAFIDGQDIHRTTAAEVFRVPLKKVNYDQRRSAKTINFGLIYGMTAFGLARQLSVS
RSEAQKYINLYFERYPEVLNYMERTRKQASIQGYVTTLDGRRLYLPDIHHSGNSRKKKVA
ERAAINAPMQGTAADIIKRAMIALDTWIQEESLPIRIIMQVHDELIFEVHHTALENAIIR
IKALMEGCFTLDVPLQVTVGVGNNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaatcacaaacaatccattaatattagtagatggttcttcttatctttatcgt
gcttattatgcctacccactattaaaaaatagtattggagaacctactggagcgatctat
ggcgtattgaatatgctaaaaagcatactaaaacaatataaaccaagccatgtagcggtg
gtctttgacgcaaagggtaagacctttcgcgatcagttattcaaaaaatacaaatcccac
agacctagcatgccaaaggatttaagtgaccaaataatacctatatatcatatggttaaa
gcaatggggctaacacagttatccatcaacggtgtcgaggcggacgatgttatcggaacg
ctagcgctggaagcagcacgcaatggtcgtaatgtgctaattagcagcagcgataaagat
atggcacagctcgtgtcgtctaaaatcaccataattaatactatgtcgaatactattctc
ggtccagaagaggtaaaactgaagttcggcgtgcctccggcactgatcattgattattta
gcgttgataggtgacaacgctgataatattcctggcgtgatcggaataggagagaaaagt
gcgaaggtgctattacgggaaataggaggggtggccgctctatatcaacaactcgataaa
gttagcaccctgaacttacggggagccaaaacaatagccgctaagcttgagaagcatcga
gaggtagcttttctctcttaccaactagcgacgattaaaactgatgtccccttagatgta
tcttatgatcatttgatagtaaaagcacccatggtgcaaacgttaacactatcatttcag
cgctatgaatttcaacgctggctaaacgatcttaaaattggaaaatggctagagaaagga
aaaatcagtggcgtctcaccgggactttttatcagacatcgcccgatagctgttgaggga
actatgcaggttttcttaaaagacgactatcaaattattgacaacatgattatgctgaat
aagtggatcacaactattcgtaacgccggagcattcgccttcaatacaaaaactgatggg
ctagatacgcttactgctaatctattaggattatgcttttccgtgaaaccgggtaaagct
gcttatttgccagtggggcataactatctcaatacgccgaatcagctcaactggaacgca
gtattagctttacttaaaccggtctttcaagactctggcattgccaaaattagtcaaaat
ctaaaattcgaatgcggaattttaaaacggcacggtatcgagataacagggatcactttt
gatattatgctggaatcctacgtcttgaatagcgttgctggccaccacgataaaaccagt
ctagctcatcgttttttagcgcacagcggtattgattttgagaagatagatagtaaaggt
taccatcaaatgccatttgatcagatgaccatggaacaggtagctctttatgctgccgaa
gagactaatgtgacattacgtttgcatcaacagttatggccgcgcattaaggaatcacca
gagctaaaaaagatctttgaagaagtcgaaataccattggtaccagttctgtcgcgcatc
gagcgttctggggtgctaatcgatgaaagcatgcttgtctcgcattccttagagctagtt
cagcgtctaaaaaagctagaagaggaagcgcatcagctagcgcaagaaccgtttaatctg
tcctcgacaaaacagattcagataatcttgtacgataagcaacaaatatcagtactaaaa
aaaactccaggtggagccccttcgactaatgaagaggtactaaccgcacttgcagtaaac
tatccgttaccaaagttaattttagaatatcgcagtctggctaagcttaaatccacctat
attgataaactccccaaaatgatcaacccattgtcaaaaagggtgcatacttcttatcat
cagtctgtcactgccactgggcgtctgtcatcaagcgatccaaacctacagaatatcccg
gttcggaataatgaagggcggcgtattcggaaagcctttattgcgccgcctggcgcgctt
attgtagcggcggattattcacagattgaactacgtattatggcgcatctctcacaagat
cctgggttgctacatgccttcatcgacggtcaagatattcatcgcaccaccgctgctgaa
gtcttcagggtgccactgaagaaggtgaattacgatcaaagacgcagtgcaaagactatt
aactttggcttgatttacggtatgactgcctttgggctagctcgtcaattatcggtctca
agatcagaggcacagaaatatataaacctctattttgaacgatatcctgaagttttaaac
tatatggaacgcacgcgtaagcaggctagtattcaaggttatgtaacgaccctagacgga
cgacgtttatacttgccagacatccatcactcgggaaatagcaggaaaaaaaaagtggcg
gagcgtgctgctattaatgcccctatgcaaggtacagctgccgacataattaaacgagca
atgattgcccttgatacctggatacaagaggaatcgttaccgattcgtataattatgcaa
gtacatgatgaactgatatttgaagttcatcataccgcgcttgaaaatgcaatcatccgt
attaaagctctaatggagggatgcttcactcttgacgtacctttacaggtaacggtaggt
gttggtaacaattgggaccaagcgcattaa
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