Candidatus Steffania adelgidicola: GFK82_00465
Help
Entry
GFK82_00465 CDS
T07600
Symbol
mrcB
Name
(GenBank) Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade00550
Peptidoglycan biosynthesis
sade01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GFK82_00465 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sade01003
]
GFK82_00465 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sade01011
]
GFK82_00465 (mrcB)
Enzymes [BR:
sade01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GFK82_00465 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GFK82_00465 (mrcB)
Glycosyltransferases [BR:
sade01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GFK82_00465 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sade01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GFK82_00465 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP1b_C
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
UDG79919
LinkDB
All DBs
Position
complement(768535..770841)
Genome browser
AA seq
768 aa
AA seq
DB search
MPTRMEKGRNKTLKKKHRQHRYFLGIILFFVLLIVLYGVYLDMQVRDRIDGKVWQLPAAV
YSRIVNLDPGMSYTQRDMGILLESMQYREVSHITLPGEFTMHTNVIELCRRSFDFPDGKE
EKIHALMKFSKNHLLEIKNQDTHRNFGFFRLDPRLITMLQPPQGEQRLFLPRTGFPSLLV
NTLIATEDRNFYKHSGISVSSICRAFLVNITAGHAVQGGSTLTQQLVKNLFLSKERSLWR
KVNEAYMAMILDYRYSKDHILELYLNEVYLGQSGNDQVRGFPLASLYYFGRPVNELSLDQ
QAMLVGMVKGASLYNPWRNLKLSLERRNLVLKLLENQHIITSKLYNILSVRPLGVKPHGG
AMTPQPAFMQMVREELQKKLGEATKELSGVKIFTTLDPLSQDAAERSVEVGVPALRNIRG
VRDLEVAIVIVDRFSGEVRAIVGGAAPQFAGFNRAMLARRSVGSLAKPATYLTALSEPDK
YRLNTWIADEPITLDQANGNPWSPKNYDRKFRGKVMLVDALSHSLNVPTVNLGLSVGLRR
ITETLVKLGIPSSVLNPVPSMLLGAISLTPIEVAQEFQTIASGGNHATLSALRSVIGEDG
TVVYQSFPQSERVVPAEAAYLTLYALQQVMSNGTSRALSLKFPFSHLAAKTGTTNDLRDS
WFAGIDGKEVFIAWVGRDNNGPAKLTGANGALTLYRRYLENQAPLTLNLYPPDDIRQMSI
NYAGDFICKDRNMLRTLPVWTTDPQLLCSNPHLGTMGKEPVIKAPVGL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacgtatggaaaaaggacgaaacaaaacactaaagaaaaaacacagacagcat
agatattttctaggaattatactgtttttcgtcctgctcattgtcttatatggcgtgtat
ttagatatgcaggtccgtgaccgtatcgatggcaaagtctggcagctaccggcagcggtc
tatagccgtatagtgaatctagatccaggcatgtcctatactcaacgtgatatgggcatt
ttgctagaaagcatgcagtaccgggaggtttcccatattacccttccgggagaatttaca
atgcatactaatgtcatcgaactctgtcgcaggtcatttgattttcctgacggtaaagag
gagaaaatccatgctcttatgaagttttctaaaaaccatcttctagagattaaaaaccag
gatacccaccgcaatttcggattttttcgtcttgatccccgattaatcactatgctgcaa
ccgccccagggcgaacaacggctgttcttgccgcgcaccggtttcccatctttactagta
aatactttaatagctactgaagaccgcaatttctataaacatagtggtatcagtgtgtcc
tcaatctgccgcgctttcttggtgaatattactgccggacatgcggtacagggaggaagc
acgctgactcagcagttggtgaaaaacttgtttctaagtaaggaacgttcgctatggcgt
aaagtcaatgaagcgtatatggcgatgatcctcgattaccgctatagcaaagatcatatc
ctggagctgtatctaaacgaggtgtatctcggtcagagtggaaacgatcaagtccgcggt
tttccgttagctagtttatattatttcggccgtcccgtgaatgaactaagtcttgatcag
caagcaatgctggtcgggatggtgaaaggggcgtcgctatataatccttggcgaaatctt
aagctctcgctagagcggcgtaatctagttttaaaattattagaaaatcaacatattatt
acaagtaagttatataatatattgagcgtccggccgttaggggtaaagcctcacggaggt
gccatgaccccgcaaccagcttttatgcagatggtgcgtgaagagctacaaaaaaaactg
ggcgaagcaaccaaggagttatccggcgttaagattttcacgactctggatccgctgtca
caggatgcagcagaaagatcggtagaggtgggtgtacccgcgttacgtaatatccgtggc
gttagggatcttgaagttgctatagtgatcgtagatcgtttcagcggagaagtacgcgct
atagttggcggggcagcaccgcagtttgctggttttaatcgagcaatgctggcaagacgt
tcagttggatccctagcgaaaccagccacttatctgactgccttgagcgaaccagataaa
tatcggcttaatacctggattgctgatgagccgattacgcttgatcaagcgaacggaaat
ccatggtcacctaaaaactatgatcgaaaattccgcggtaaggtgatgctagttgatgca
ttaagtcattcgcttaatgtgcctacagtcaatctcggtctttccgtcgggcttcgtcgt
attactgagacactagtaaagttaggcattccgtcttctgtactgaatccggttccttca
atgttacttggggctatcagtttgactcccatagaagtagctcaggagtttcagacgatc
gctagcggcggtaaccatgctacactgtcagctttacgatcagtgataggtgaagatggc
accgtagtttatcaaagttttcctcaatcggaaagagtggtgcctgcagaagcggcttac
ttaacgttgtatgcgctgcagcaggtgatgtcaaacgggacgtctcgtgcgttatcactc
aagttcccattttctcatctagctgcaaaaactggaaccactaacgatttacgtgatagt
tggtttgctggtatcgatgggaaagaggtgtttattgcatgggttgggcgtgataataat
ggtcctgccaagttaaccggcgcaaatggggcactaacgttatatcgtcgttatcttgag
aaccaggcacccttaacattgaacttatatccaccggatgacatccggcagatgtccatt
aactatgcgggggattttatctgcaaggatagaaatatgctacgcactttaccggtttgg
acaaccgatccgcagttactgtgctctaacccccacctgggaactatgggaaaagaaccg
gttatcaaagcccctgtaggcctctga
DBGET
integrated database retrieval system
