Candidatus Steffania adelgidicola: GFK82_00504
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Entry
GFK82_00504 CDS
T07600
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03030
DNA replication
sade03430
Mismatch repair
sade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFK82_00504 (holA)
03430 Mismatch repair
GFK82_00504 (holA)
03440 Homologous recombination
GFK82_00504 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sade03032
]
GFK82_00504 (holA)
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00504 (holA)
Enzymes [BR:
sade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFK82_00504 (holA)
DNA replication proteins [BR:
sade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFK82_00504 (holA)
DNA repair and recombination proteins [BR:
sade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFK82_00504 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Thermo-DBP
Motif
Other DBs
NCBI-ProteinID:
UDG79954
LinkDB
All DBs
Position
831815..832846
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPDQLLTNLKASCFPCYFLFGNEPLLLQESEDYIRKEAQIQQFDEHFNVILDSNTD
WEEIFNLCKTRSLFASRQTLRLILPDGNTQAVISDKLLQLTALLHNNLVLILRGSKLTPA
VEKCGWFKALSPTAVLVSCSTPEKTQLPGWVARRAKKMKLALDDAACHLLCYAYEGNLLA
LAQALDRLLLIYPNAHLTLSQVKATVNDTSDLTLFHWINAAIMGNSKRAARVLYQLQLKT
TEPVILLRIIQREVLLLLMLKRHAIIEPIYTLFERHKISQNRRSLLTNAVSRLTLSQLKD
TIALMNKIERSLKQDYSYLAWSDFHALALLLCGKSIPEVMING
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttgtatcccgaccagttgctaacaaaccttaaagcatcctgcttcccctgt
tattttctattcggtaatgaaccattattgctacaggaaagcgaagattatattcgtaaa
gaagctcagatacagcagtttgacgaacattttaatgtcatattagacagcaacactgat
tgggaagaaatcttcaacctatgtaaaacacgcagcctattcgctagtcgtcaaacgcta
cgccttatattaccggacggtaatacccaagccgtcataagcgacaaactgctgcagctc
acagcattgttacataataatttagtcttgatcttgcgcggcagcaagctgactccagct
gtagagaaatgcggatggtttaaagcactgagtccaactgcagtgctagtaagctgtagc
actccagaaaaaacacagctacctggatgggtagcaagacgtgctaaaaagatgaagtta
gcgctagatgatgctgcctgtcatcttctttgttatgcgtatgaaggcaacttgctagca
ctagcccaagcgctcgatcggctgttgctaatttatcccaatgctcacctgaccctatcg
caagttaaagctaccgtaaacgatacttcagacttgacactgtttcactggatcaacgcc
gctatcatgggaaacagtaaacgcgcagcgcgggttctttatcaactacaactaaaaact
acagaaccggtcatattgctacgtattattcagcgtgaagtcctattgctactgatgttg
aaacggcatgccattatcgaaccaatctacacactatttgagcgtcacaaaatatctcag
aaccgtcgatcactgctcactaacgcagtaagtcgactcactctttcacagctgaaggac
acgatagccttaatgaataaaattgaacgctcacttaagcaggattacagctacctcgca
tggtctgattttcatgctttagcactattgttatgcggcaaaagcatacctgaagtcatg
attaatgggtaa
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