Candidatus Steffania adelgidicola: GFK82_00559
Help
Entry
GFK82_00559 CDS
T07600
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sade
Candidatus Steffania adelgidicola
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00559 (phrB)
Enzymes [BR:
sade01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GFK82_00559 (phrB)
DNA repair and recombination proteins [BR:
sade03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GFK82_00559 (phrB)
Prokaryotic type
GFK82_00559 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UDG80006
LinkDB
All DBs
Position
926656..928119
Genome browser
AA seq
487 aa
AA seq
DB search
MITRLVWLRNDLRIHDNTALHAACNEQEVKVLAVFIATPVQWRRHGMSPRQATFIYDNLI
YLEQALTECQIPFLYHQCDDFNAAVRWLRNYCYKEEVKEIFYNRQYEVNERKRDLQLEME
IGKETICKGFDDGVILPPGSILNQKLQMYKIYTPFRTAFVRKLIASEISPLPSPKVRQGG
GGQQKIPFFDYPHQKVDKKFPSGEKAALNRLRTFCQVGMPTYIQRRDLPGINGTSCLSPY
LTIGVISPRQCLHELYVAYPDFLEKTDSSPFCWFSELIWREFYRHLIVAYPFLCMNKPFI
NWTDNIFWNKNPAALHAWQQGITGYPLVDAAMRQLNTIGWMHNRLRMITASFLVKNLLID
WRIGEQYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGKRYDPKGNFIRKW
VPELNHVPDEYIYAPHAWLERNGAVLNYPEKIIDYQHTQKKTLAAFHAAKDYSFKISRKN
SFMNKNS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgattactcgtcttgtttggctacgtaacgatctccgaatccatgataatacagcatta
catgctgcctgcaacgagcaggaagtaaaggtccttgctgtctttatcgctacgcctgta
caatggcgccggcatggaatgtctcctcgccaagcaacatttatctacgataatctaata
tatttagaacaagcattgacagaatgtcagattccttttctgtatcatcaatgcgatgat
tttaatgctgcagtaagatggttgcgcaattattgttataaagaagaggtcaaggaaatt
ttctataatcgtcagtatgaagtaaacgaacgtaaacgtgatctccaattagaaatggag
ataggtaaggaaacaatttgtaaaggttttgatgatggggtaatcctgccaccaggcagt
atcttaaatcagaagcttcagatgtacaagatatatacaccatttcgcacggcatttgtt
cgtaaactaatagcatcggaaatctctccattaccctcccctaaagttcgtcaagggggg
gggggccaacaaaaaattcctttttttgattatccccatcaaaaagtagataaaaaattt
ccttctggtgaaaaagcagcgttaaatcgcttacgcacattttgtcaagttggaatgcca
acctatattcaacgacgtgatctaccaggtattaacggtaccagttgtttatctccctac
ttaacgattggtgtcatttcacctcgacaatgtcttcatgaattatatgtagcataccca
gattttttagagaaaacggatagttctcctttctgttggttcagtgagctgatctggcgt
gaattttatcgtcatttaatcgtagcatatccatttttatgtatgaataaaccgtttatt
aattggaccgataatatattctggaataaaaatccagcagctttacatgcctggcaacaa
ggaatcactggataccctctcgttgacgcagcgatgcgtcaactcaatacaatagggtgg
atgcataatcgcctacgaatgatcaccgctagcttcttagtcaaaaaccttctaattgat
tggagaataggtgagcagtattttatgtcacagttattagatggagatttggcagctaac
aatgggggttggcaatgggcagcctctacaggtactgatgcagcaccttattttaggatt
ttcaatcccactactcaagggaagcgttacgatccaaaaggtaattttatacgaaaatgg
gtgcctgaactcaaccatgttccagatgaatatatctatgctccacatgcttggttagaa
agaaatggagcagtcctaaattatccagaaaaaattattgattatcagcatactcaaaaa
aaaaccctcgctgcatttcatgccgctaaggattattcctttaaaatttcaagaaaaaat
tcctttatgaataaaaattcataa
DBGET
integrated database retrieval system
