Candidatus Steffania adelgidicola: GFK82_00593
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Entry
GFK82_00593 CDS
T07600
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFK82_00593 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sade03019
]
GFK82_00593 (rppH)
Messenger RNA biogenesis [BR:
sade03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GFK82_00593 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UDG80040
LinkDB
All DBs
Position
990827..991345
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AA seq
172 aa
AA seq
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MIDNNGYRSNVGIVICNLNGQVLWAKRYGQRSWQFPQGGINAGETAEQAMYRELFEEIGV
SRKDVDILAATHYWLRYKLPKRLVRWDRKPICIGQKQKWFLLRLISSDGAINMRQGEIPE
FDMWCWVSFWYPVRQVVSFKRDVYRRVMKEFSAAITSGMHSSVFPHRRKKSK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgataataatggctaccgatcgaatgttggtattgtcatttgcaatctcaacggg
caagtgctatgggctaagcgctatggtcagcgttcctggcaattccctcaagggggtatc
aatgctggcgagaccgctgagcaggcaatgtaccgtgagttatttgaagagatcggcgta
agccgaaaagatgtagatatcctcgctgcaacgcattactggttacgttataaacttccc
aagcgattagtgcgctgggatagaaaaccaatatgtattggtcagaaacaaaaatggttt
cttctacgacttatatcttcagatggagctatcaatatgcgccagggagaaatccctgaa
tttgatatgtggtgctgggttagcttctggtatccggtacgtcaggtcgtttcttttaaa
cgagacgtttatcgtcgggtaatgaaagaattttctgcggctataacgtcaggtatgcac
tcttcagtctttccgcacagacgaaaaaaatctaaataa
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