Candidatus Steffania adelgidicola: GFK82_00618
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Entry
GFK82_00618 CDS
T07600
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03420
Nucleotide excision repair
sade03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFK82_00618 (uvrD)
03430 Mismatch repair
GFK82_00618 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00618 (uvrD)
Enzymes [BR:
sade01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFK82_00618 (uvrD)
DNA repair and recombination proteins [BR:
sade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFK82_00618 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GFK82_00618 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UDG80063
LinkDB
All DBs
Position
complement(1037963..1040029)
Genome browser
AA seq
688 aa
AA seq
DB search
MDASDLLNRLNDKQQAAVAAPCGKLLVLAGAGSGKTRVLVHRIAWLLSVENHSPDSVLAV
TFTNKASAEIRKRIQQLIGSKQSGIWIGTFHGLAYRLLRAHYQDVNLPPDFLIIDNEDQL
RLLKRLIRAMNLDDKQWSSRQAMWYIGSKKDKGLRPQGLTGSSNLLDSTWQRIYQTYQEA
CDRAGLVDFSELLLRGYELLLKNKSYVLCHYRARFTNILVDEFQDTNQIQYAWLRLLASN
NSNMMIIGDDDQSIYGWRGARVENIQRFLEDFPKAQTIRLEQNYRSTSNILQAANTLIAN
NGFRLGKKLWTKDAEGDPITLYCACNELDEARFVIHQIKMNQQKGGALKDCAILYRSNAQ
SRIFEEILVQIGLPYRIYGGTHFFESQEIKDVIAYLRLIANRNDDTAYERVVNMPPRGLG
NRTLDVVRNTARNRKLTLWQSSWALLSENLLSGRAASALQQFLELLNKMEKETAALSLGM
QTDQVIKNSGLWNMYRRERSEKSQVRIENLEELVTASCQFHYINADRKQLPLHAFLSHIS
LEAKEDPLDTYQDAVQLMTLHAAKGLEFKHVFIVGMEEGIFPSHMSLNERSRLEEERRLA
YVGLTRAMKKLTITYAETRRVYGKEVCHQASRFIAELPLSCIEEVHMRANVSYPSTYYPM
GIFLKENDSECPLTEKSTSPNILGEYSG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttctgatttacttaacagattgaatgacaagcaacaagcagctgtggcagcg
ccgtgtggtaagttactagtattagccggtgctggtagtggtaaaactcgagttctggta
catcgtattgcctggcttttatcagttgaaaaccactctcctgattcggtgctggccgtg
acgtttactaataaagcatcagcggaaatacgaaagcgtattcaacagcttatagggtct
aagcagagcggaatatggattggtacttttcatggactcgcgtatcgcttgttacgcgcc
cactatcaggatgtcaacttgccgccggatttcttaattattgacaatgaggatcagttg
cgtttgttaaaacgacttatacgcgcgatgaatttagatgacaaacagtggtcatcgcgc
caggcgatgtggtatatcggtagtaaaaaagataaggggttacgccctcagggattaaca
ggttccagtaatttgctcgattctacctggcaacgtatctatcaaacctatcaagaagcg
tgtgatcgagctggattggtagatttttctgaattgctgctacggggttatgagttatta
ctaaaaaataagtcatatgttttatgccattatcgcgcacgtttcactaatatcctggtg
gatgaattccaggatactaaccaaattcagtatgcctggctccgtcttttagctagtaat
aatagtaatatgatgatcatcggcgacgatgatcagtcgatttacggctggcgtggggca
cgggtagaaaatattcaacgattcttagaagattttcctaaagcacagactatacgtcta
gagcaaaattaccgttctactagtaatattctccaagcggccaatacccttattgctaac
aacggattccggctaggtaaaaaattatggacaaaagatgcagaaggtgacccaattacc
ttgtactgtgcttgtaacgaattagatgaggctcgttttgtgattcatcagattaagatg
aatcaacagaaaggcggagcgcttaaagactgcgctatcctatatcggagtaatgctcag
tcgcgtatttttgaagagatattagtgcagataggtctaccttatcgtatttatggcggt
acacacttttttgaatcccaggaaatcaaggatgtaattgcctatttgcgtcttattgct
aaccgtaatgatgatacagcatatgaacgggtcgtaaatatgccacctcgcggacttggt
aatcgtactcttgacgtagtacggaacactgcccgtaatcgaaagttaacgctgtggcaa
tccagttgggcgttactttcagagaatctgttatctggtcgcgctgcctctgctttgcag
caatttttagaattgcttaataaaatggagaaagaaacggcagctttatcattaggtatg
caaactgatcaagtgatcaagaactctggtctttggaatatgtacaggcgggaaagaagt
gaaaaaagtcaggttcgtattgaaaatcttgaagagttagtcactgctagctgccagttc
cattatatcaatgcagatcggaagcagttaccactgcacgcttttctctctcacatttcc
ttggaggccaaggaagacccacttgatacctatcaagatgctgtgcaattaatgacattg
catgctgccaaagggcttgagtttaaacatgtttttattgtcggtatggaagaaggaata
tttcccagtcatatgtcattaaatgaacgatctcgattagaagaggagcgtcgtcttgca
tatgttggccttacacgcgcgatgaaaaaactaactatcacttatgcggagactcgccga
gtatacgggaaagaagtatgccatcaggcatcgcgttttatcgccgaacttccgttatca
tgtatagaagaagtacatatgcgcgctaatgtgagttatccaagcacttattatccgatg
gggatttttctcaaggagaacgatagtgagtgcccccttactgagaaaagtacatcacct
aacattttaggtgaatacagtggttaa
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