Candidatus Steffania adelgidicola: GFK82_00696
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Entry
GFK82_00696 CDS
T07600
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade03030
DNA replication
sade03430
Mismatch repair
sade03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFK82_00696 (dnaE)
03430 Mismatch repair
GFK82_00696 (dnaE)
03440 Homologous recombination
GFK82_00696 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sade03032
]
GFK82_00696 (dnaE)
03400 DNA repair and recombination proteins [BR:
sade03400
]
GFK82_00696 (dnaE)
Enzymes [BR:
sade01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFK82_00696 (dnaE)
DNA replication proteins [BR:
sade03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFK82_00696 (dnaE)
DNA repair and recombination proteins [BR:
sade03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFK82_00696 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UDG80128
LinkDB
All DBs
Position
1158073..1161555
Genome browser
AA seq
1160 aa
AA seq
DB search
MAAPRFIHLHIHSDYSMIDGLTKVDALVKKAASLHMPALAITDFSNLCGLIKFYNTAHKA
GIKPIIGVDCFMHSDMLGNELADLSILAANNVGYQHLILLISNAYKRGYSAAGPVIDRNW
LMKHNEGLILLSGARKGDVGKYLIRGKMSQVEQCLAFYELYFPDRYYLELIRTGREEEER
YLHAAVKLAANRNLPIVATNDVRFNNVSDFDAHEIRVAIHDGFTLSDGKRPRTYSPQQYM
RTEEEMCILFADLPEALANSVEIARRCNVIIRLDEYFLPQFPTGEMSTEDYLIKCAHAGL
EDRLTLLFPHGNTREEKRFSYDERLDTELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYSLKITDIDPLEFDLLFERFLNPERVSMPDFDIDFCMEKRDLVIDHVAE
TYGRNAVSQIITFGTMAAKAVIRDVGRVLEHPYGFVDRIAKLIPLDPGMTLEKALVTVPQ
LQTIYNGDEEVKTLIDMAKKLEGVIRNAGKHAGGVVIAPTKITDFTPLYCDSEGNYPVTQ
FDKNDVECTGLVKFDFLGLRTLTIINWALDMINSQRIRQGLEPINITTIPQQDAKSFDML
QRSETTAIFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHPSLQPILEPTYGIILYQEQVMKIAQVLAGYTLGGADMLRRAMGKKKTEEM
AKERSVFKSGAESIGVNGKLSMKIFDLLEKFAGYGFNKSHSAAYALISYQTLWLKTHYPA
EFMAAVMSADMDNTEKIVGLIDECLRMGLKVLPPDINTGQYHFYVNQNGEIVYGIGAIKG
VGEKPVKIIIKARNQYGPFRKLFDLCAYADIKKINRRVLEKLIMAGAFDRLGPHRAALIH
SLSSALKTANQHAKTEAIGQGDMFGIITQPMETVESVYNSVLPWPEQVLLDRERDTLGFY
LTGHPITQYLYEIKQYTGGIRLKDLHPTSRGTIVIAVGIVLTTRVILTKRGNRIGICTLD
DHSARLDVLLFRKTLEKYQHLLKKDRILIAQGEVNIDNFNGGLKMIAHEIMDINEAREKY
AHGLGILLTDKQIDEQFLKRLRLSLELHRFGTIPVHLYYQRKNMHARLRFGETWRVKPSD
SLLNDLRTLVGNEQVKLEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccacgttttattcatctgcatatacatagcgactattctatgatcgacggg
ctgaccaaagttgacgcattggtaaaaaaagcggcatctctgcatatgccagcgctagct
attaccgattttagcaatttatgcgggctgattaaattttataacaccgcacataaggcg
ggtattaaaccaattataggcgttgattgtttcatgcatagtgacatgttgggcaatgaa
ctagcggatttgagtattttggcagccaataatgtgggttaccagcatctaattctgcta
atttcaaacgcctacaaacgcggatatagcgctgctggaccagtcatcgaccgaaattgg
ttaatgaagcataacgaaggattaattttactttcgggcgcacgaaaaggggatgttggc
aagtacttaatacgtggcaagatgtctcaagtagaacagtgtttagccttctacgaactc
tatttccccgaccgctattatttagaacttatccgcactggtcgagaagaagaagagcgt
tatctacacgctgcagtgaaattagcagctaatcgaaacctaccgatagtagcaactaat
gacgtaagatttaacaatgtaagcgacttcgatgcccatgagatccgggtagcgattcat
gatggattcactcttagtgatggtaaacgaccacgcacttatagtccacagcagtatatg
cgcaccgaagaagaaatgtgtatactcttcgctgatcttccggaagctttagcgaacagc
gtagaaattgctagacgctgtaatgtgatcatccgtctcgatgaatatttcctaccccaa
tttccgaccggtgaaatgtctactgaggattacctcatcaaatgtgcacacgcaggtctg
gaagaccgattaaccctcctctttcctcacggcaatacacgagaagaaaaacgcttttcc
tatgacgaacgtttagatactgaactcaaggtcataaaccagatggggtttccaggttat
tttttaatcgtgatggagtttatccaatggtctaaggataatgggatacctgtaggacct
ggtcgaggatctggtgcaggctctttagtggcctattcattaaaaattaccgacattgat
ccattagagtttgatctactattcgaacgttttttaaatccagaacgcgtatcgatgccg
gattttgatattgatttctgcatggaaaaacgcgatctagtaattgatcacgtagccgaa
acatacggccgcaacgcggtttcccaaatcattacattcggtacgatggcagcaaaagcg
gtcattcgtgacgtcgggcgagtattggaacatccttacggtttcgtcgatcgcattgcg
aaactgataccactcgatcctggaatgaccctagaaaaagctttggttaccgtaccgcaa
ttgcaaacaatctataatggcgatgaagaagtcaagacattgattgacatggctaaaaag
cttgaaggggtgatacgaaatgcaggcaaacatgctggaggcgtggtaattgcacccact
aaaattactgattttacaccactttactgtgattctgaaggcaactatccagttacccag
ttcgacaagaacgatgtggaatgcactggcctagtaaaatttgactttctcggcttgcgt
actctcacgatcataaactgggcactagatatgattaattcacaacgtatacgacaaggt
ctagaacccatcaatatcactactattccacaacaggatgcaaaaagttttgatatgctg
cagcgctccgaaaccactgcaatatttcagttagaatcgcgcggtatgaaagatctaatt
aagcgtctacaacctgattgttttgaagatattatcgcattagtagcattattccgcccc
ggaccgttacaatcaggcatggtagataactttatcgatcgcaaacatggacgtgaagcc
atctcttatcccgatattgaatggcaacacccatcgcttcaacccattctcgaaccaacc
tatggtatcattctttatcaagaacaagttatgaagatagcccaggttcttgcaggttat
accctaggcggtgcagatatgctacgacgtgcgatggggaaaaagaaaaccgaagaaatg
gctaaagaacgctcggtatttaaatccggagcagaaagtattggtgttaacggaaaacta
tcaatgaagatcttcgatcttctcgagaaattcgccggctacggcttcaataaatcccat
tctgctgcctatgcgctaatctcgtatcaaacgttatggctaaaaacacattatcccgcc
gaatttatggcggcagtgatgtctgcagatatggacaatactgaaaaaatagtaggcttg
attgacgaatgtttacgcatgggtcttaaggtattaccaccagatattaacaccggtcaa
taccatttttacgttaatcaaaacggtgaaatagtttacggaatcggagcaattaaaggt
gtcggagaaaaacctgttaaaatcattattaaggcacgaaaccagtacggtccatttcgt
aaattatttgatctatgtgcctatgctgatataaaaaaaatcaaccgccgagttcttgaa
aagctaattatggctggtgcctttgaccgcctaggtccgcatcgcgcagcgctgattcat
tctctcagcagtgctctcaagactgctaatcaacacgctaaaactgaggccattggtcaa
ggtgacatgttcggcataattactcaaccaatggaaacagtagagagtgtgtataatagc
gtgctaccttggcctgagcaggtacttttagatcgagaacgtgacacgcttggtttctac
ttgacgggccacccaattactcaatatctttacgaaattaaacaatatacgggtgggatt
cgtctcaaggatctacaccccacctcacgcggaacaatagttatcgcagtaggcatagta
ctcactactcgagtcatactcactaagcgtggcaaccgaatcggcatttgtaccttggac
gatcattctgccagactagatgtacttctgtttagaaaaacactagaaaaataccagcat
ttactaaaaaaagaccgtattcttatcgctcagggagaagtgaacattgataattttaac
ggcggtttaaagatgatcgcgcatgaaatcatggacattaatgaagcacgtgaaaaatat
gcacatggacttggtatattgctaaccgataaacaaattgatgagcagtttctaaaacgt
ctccgtttgtcgttagaattgcatagatttgggacgattccagtacatctttattatcaa
cgaaaaaatatgcatgcacggcttcggtttggagaaacatggagagtgaagcccagtgac
agtttactgaatgatttgcgaacacttgtaggaaatgaacaggtgaaattagaatttgat
tag
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