Staphylococcus aureus subsp. aureus Newman: NWMN_0504
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Entry
NWMN_0504 CDS
T00557
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sae
Staphylococcus aureus subsp. aureus Newman
Pathway
sae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NWMN_0504 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sae03021
]
NWMN_0504 (rpoB)
03400 DNA repair and recombination proteins [BR:
sae03400
]
NWMN_0504 (rpoB)
Enzymes [BR:
sae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NWMN_0504 (rpoB)
Transcription machinery [BR:
sae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NWMN_0504 (rpoB)
DNA repair and recombination proteins [BR:
sae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NWMN_0504 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
ATP-grasp_6
Motif
Other DBs
NCBI-ProteinID:
BAF66776
UniProt:
A6QEJ4
LinkDB
All DBs
Position
576077..579628
Genome browser
AA seq
1183 aa
AA seq
DB search
MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYEWFLREGLIEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGFSSDQEIVDLLGDNEYLRNTLEKDGTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKTNKKLHLKHRLFNQKLAEPIVNTETG
EIVVEEGTVLDRRKIDEIMDVLESNANSEVFELHGSVIDEPVEIQSIKVYVPNDDEGRTT
TVIGNAFPDSEVKCITPADIIASMSYFFNLLSGIGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTESITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDLDTHAITDQIDYLTADEEDSYVVAQANSKLDENGRFMDDEVVCRFRGNNT
VMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTG
MEHVAARDSGAAITAKHRGRVEHVESNEILVRRLVEENGVEHEGELDRYPLAKFKRSNSG
TCYNQRPIVAVGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSESALKNLDDRGIVYIGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDT
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGL
DVKVMDEQDNEIEMTDVDDDDVVERKVDLQQNDAPETQKEVTD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtcaagttgtccaatatggaagacatcgtaaacgtagaaactacgcgagaatt
tcagaagtattagaattaccaaacttaatagaaattcaaactaaatcttacgagtggttc
ctaagagaaggtttaatcgaaatgtttagagacatttctccaattgaagattttactggt
aatttgtcattagagtttgtggattaccgtttaggagaaccaaaatatgatttagaagaa
tctaaaaaccgtgacgctacttatgctgcacctcttcgtgtaaaagtgcgtctaatcatt
aaagaaacaggagaagttaaagaacaagaagtctttatgggtgatttcccattaatgact
gatacaggtacgttcgttatcaatggtgcagaacgtgtaatcgtatctcaattagttcgt
tcaccatccgtttatttcaatgaaaaaatcgacaaaaatggtcgtgaaaactatgatgca
acaattattccaaaccgtggtgcatggttagaatatgaaacagatgctaaagatgttgta
tacgtacgtattgatagaacacgtaaactaccattaacagtattgttacgtgcattaggt
ttctcaagcgaccaagaaattgttgaccttttaggtgacaatgaatatttacgtaatact
ttagagaaagacggcactgaaaacactgaacaagcgttattagaaatctatgaacgttta
cgtccaggtgaaccaccaactgttgaaaatgctaaaagtctattgtattcacgtttcttt
gatccaaaacgctatgacttagcaagcgtgggtcgttataaaacaaacaaaaaattacat
ttaaaacatcgtttatttaatcaaaaattagctgagccaattgtaaatactgaaactggt
gaaattgtagttgaagaaggtacagtgcttgatcgtcgtaaaatcgacgaaatcatggat
gtacttgaatcaaatgcaaacagcgaagtgtttgaattgcatggtagcgttatagacgag
ccagtagaaattcaatcaattaaagtatatgttcctaacgatgatgaaggtcgtacgaca
actgtaattggtaatgctttccctgactcagaagttaaatgcattacaccagcagatatc
attgcttcaatgagttacttctttaacttattaagcggtattggatatacagatgatatt
gaccatttaggtaaccgtcgtttacgttctgtaggtgaattactacaaaaccaattccgt
atcggtttatcaagaatggaaagagttgtacgtgaaagaatgtcaattcaagatactgag
tctatcacacctcaacaattaattaatattcgacctgttattgcatctattaaagaattc
tttggtagctctcaattatcacaattcatggaccaagcaaacccattagctgagttaacg
cataaacgtcgtctatcagcattaggacctggtggtttaacacgtgaacgtgctcaaatg
gaagtacgtgacgttcactactctcactatggccgtatgtgtccaattgaaacacctgag
ggaccaaacattggattgattaactcattatcaagttatgcacgtgtaaatgaattcggc
tttattgaaacaccatatcgtaaagttgatttagatacacatgctatcactgatcaaatt
gactatttaacagctgacgaagaagatagctatgttgtagcacaagcaaactctaaatta
gatgaaaatggtcgtttcatggatgatgaagttgtatgtcgtttccgtggtaacaataca
gttatggctaaagaaaaaatggattatatggatgtatcgccgaagcaagttgtttcagca
gcgacagcatgtattccattcttagaaaatgatgactcaaaccgtgcattgatgggtgcg
aacatgcaacgtcaagcagtgcctttgatgaatccagaagcaccatttgttggtacaggt
atggaacacgttgcagcacgtgattctggtgcggctattacagctaagcacagaggtcgt
gttgaacatgttgaatctaatgaaattcttgttcgtcgtctagttgaagagaacggcgtt
gagcatgaaggtgaattagatcgctatccattagctaaatttaaacgttcaaactcaggt
acatgttacaaccaacgtccaatcgttgcagttggagatgttgttgagtataacgagatt
ttagcagatggaccatctatggaattaggagaaatggcattaggtagaaacgtagtagtt
ggtttcatgacttgggacggttacaactatgaggatgccgttatcatgagtgaaagactt
gtgaaagatgacgtgtatacttctattcatattgaagagtatgaatcagaagcacgtgat
actaagttaggacctgaagaaatcacaagagatattcctaatgtttctgaaagtgcactt
aagaacttagacgatcgtggtatcgtttatattggtgcagaagtaaaagatggagatatt
ttagttggtaaagtaacgcctaaaggtgtaactgagttaactgccgaagaaagattgtta
catgcaatctttggtgaaaaagcacgtgaagttagagatacttcattacgtgtacctcac
ggcgctggcggtatcgttcttgatgtaaaagtattcaatcgtgaagaaggcgacgataca
ttatcacctggtgtaaaccaattagtacgtgtatatatcgttcaaaaacgtaaaattcat
gttggtgataagatgtgtggtcgacatggtaacaaaggtgtcatttctaagattgttcct
gaagaagatatgccttacttaccagatggacgtccgatcgatatcatgttaaatcctctt
ggtgtaccatctcgtatgaacatcggacaagtattagagctacacttaggtatggctgct
aaaaatcttggtattcacgttgcatcaccagtatttgacggtgcaaacgatgacgatgta
tggtcaacaattgaagaagctggtatggctcgtgatggtaaaactgtactttatgatgga
cgtacaggtgaaccattcgataaccgtatttcagtaggtgtaatgtacatgttgaaactt
gcgcacatggttgatgataaattacatgcgcgttcaacaggaccatattcacttgttaca
caacaaccacttggcggtaaagcgcaattcggtggacaacgttttggtgagatggaggta
tgggcacttgaagcatatggtgctgcatacacattacaagaaatcttaacttacaaatcc
gatgatacagtaggacgtgtgaaaacatacgaggctattgttaaaggtgaaaacatctct
agaccaagtgttccagaatcattccgagtattgatgaaagaattacaaagtttaggttta
gatgtaaaagttatggatgagcaagataatgaaatcgaaatgacagacgttgatgacgat
gatgttgtagaacgcaaagtagatttacaacaaaatgatgctcctgaaacacaaaaagaa
gttactgattaa
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