Shewanella aegiceratis: K0H80_01920
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Entry
K0H80_01920 CDS
T09153
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H80_01920 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_01920 (priA)
Enzymes [BR:
saeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H80_01920 (priA)
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H80_01920 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_22
AAA_19
DUF2321
DUF5816
Zn_ribbon_6
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
QYJ82808
LinkDB
All DBs
Position
complement(420200..422395)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQAFSYRVKEADLDKAQVGVRVRVPFGRQQLIGLVTGLSQSCDLAPN
QIKSVITFLDHEGVLPPSLYKLTQWAARYYFCSLGQMLSQALPVALRKGAEVEAQQLQIW
RVTAAGQEADIDLLKRAPAQRKLLLALLETELSQDELNALELSKTALKALVERGWIECIE
RRIASNLSWRDGLELDETPHQLNPEQAIAVATLNQQQGYHCTLLEGITGSGKTEVYLALL
ETVLKQGKQALILVPEIGLTPQTISRFKRRFKVQVAVIHSGLTDNQRLSAWRLARSGEAA
IIIGTRSALFTPMRYPGIIILDEEHDASFKQQEGIGYHARDLAVMRGHLESIPVLLGSAT
PSLETLQNALSGRYQHLSLGSRAGAAEKVRQGIIDIRNQPLKNGLSHGLLNEMRIHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQYAIPRQCHQ
CGSTMLMGQGVGTEQLADALAKEFPNYPVVRIDRDTTSRKGALETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLLQT
HQCDNPILRELMHKGYGEFARGQLEERKQALLPPAWHMLLLRAEAHKAEDADAFLAQVAQ
LLPQDEQCEIIGPMPAPMDRKAGKFRRQLMFQTKTRGLLQQAFEQALPQIEALPLAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtttgtcgaagtcgccctccccgtccccatgcgccaggcgtttagctatcgc
gtcaaagaggccgatctcgacaaggctcaggtaggcgtcagggtcagagtcccctttggc
aggcagcaactgatcgggttggtgacaggcctaagccagagctgcgacctggcgccgaac
cagatcaagtcggttatcaccttcctcgaccatgaaggggtattgcccccctcgctgtac
aagctgacccaatgggccgcccgctactatttttgcagcctggggcagatgttgtctcag
gccctgccggtcgccctgcgtaagggggccgaggtagaggcgcagcagcttcagatctgg
cgcgtgaccgctgccggacaggaagcggatatcgatctgctaaagcgtgcacccgcccag
cgcaagctgctgcttgccctgttagagacagagctcagccaggatgaactcaatgccctg
gagctgagcaagacggcgctgaaggctcttgttgaacggggctggatagagtgtatcgag
cggcgtatcgcatcaaatctcagctggcgtgacgggctcgaactcgatgagacgccccat
cagctcaatcccgagcaggccattgcggttgccaccctcaaccagcagcagggctaccac
tgtaccctactcgaggggatcacaggttcgggcaagacagaggtctatctggcgctgctg
gaaacggttcttaagcagggcaaacaggcgctgatcttggtgcccgagattggcctgaca
ccccagaccatcagccgcttcaagcgtcgcttcaaggtgcaagtagcggtgatccactct
gggctcaccgacaatcaacgcctgagcgcctggcgcctggccagaagcggcgaagccgcc
atcatcatcggtacccgctcggcgctgttcacccccatgcgctatcccggcatcatcata
ttggatgaggagcacgacgccagcttcaagcagcaggaggggatcggctatcacgcccgg
gacctagccgtgatgcgcggccatctggaatcgattcccgtgctccttggcagcgccacc
ccctccctggagacgctgcagaatgccctctccgggcgctaccaacacctgagcctgggc
agccgcgccggcgccgccgagaaggtgcgacaggggatcatcgacatccgcaatcagccg
ctgaagaatggcctctcccacggcctgctcaacgagatgcgtatccatctggatgcgggc
aatcaggtgctgctgtttctcaaccgtcgcggcttcgccccggcgctgctgtgtcacgag
tgcggccacctgcacgagtgcgatcgctgcgacgccttcttcacagtgcatcagtccctc
ggcgagatccgttgccaccactgcggcaatcagtacgccatcccccggcagtgccaccag
tgcggcagcaccatgttgatgggccaaggggtgggcacagagcagctggccgacgctctg
gctaaggagtttcccaactaccctgtggtgcggatcgaccgcgacaccaccagccgcaaa
ggggcgctggaaacccaccttaacgccatccataagggggaatataagatcttggtcggc
acccagatgctcgccaagggccaccatttccccgacgtcaccctggtcggcctgttagat
gtggatggcgccctgttcagcgccgactttcgcgcccccgagcgtttcggccagctctat
actcaggtatcgggccgcgccggacgagcgcgcaagccgggcactgtgctgctgcagacc
caccaatgtgacaaccccatactgagagagttgatgcacaaggggtatggcgagttcgcc
cgcggccagctagaggagcgtaaacaggccctgttgccgccggcctggcacatgttgctg
ctgcgcgccgaggcccacaaggcagaggacgccgacgccttcctggcccaggttgcccag
ttactgccgcaagacgagcagtgtgagatcataggccccatgcccgcgcccatggacaga
aaggccggcaagttccgccgtcagctgatgttccagaccaagacccgcgggctgttgcag
caggccttcgagcaggcattgccgcagatcgaagccctgcccctggccaagcgatgccgc
tggagcctagatcgcgacccgcaggatctcctgtga
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